Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AC073347.1-201ENST00000421633 2643 ntBASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
KRTAP4-3Q9BYR4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 MIR326-201ENST00000362220 95 ntBASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 MIR1202-201ENST00000408529 83 ntBASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 RPL7P3-201ENST00000441388 714 ntBASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 AC099548.2-209ENST00000480264 625 ntBASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 KRT90P-201ENST00000549264 1064 ntBASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 AP005482.1-201ENST00000563722 1273 ntBASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP4-3Q9BYR4 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms