Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
PCGF1Q9BSM1 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
PCGF1Q9BSM1 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
PCGF1Q9BSM1 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
PCGF1Q9BSM1 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
PCGF1Q9BSM1 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
PCGF1Q9BSM1 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
PCGF1Q9BSM1 AP003680.1-201ENST00000598970 3660 ntBASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 SPDYE18-201ENST00000510091 1050 ntBASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 AL662799.1-202ENST00000614205 422 ntBASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 AC010491.1-201ENST00000563101 2797 ntBASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
PCGF1Q9BSM1 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 AZGP1P1-201ENST00000411909 902 ntBASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 AC114501.2-201ENST00000439631 535 ntBASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 TPRX2P-201ENST00000535362 881 ntBASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 AC074044.1-201ENST00000609673 707 ntBASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms