Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
VRK1Q99986 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.78□□□□□ -0.2
VRK1Q99986 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
VRK1Q99986 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.78□□□□□ -0.2
VRK1Q99986 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 AL139010.1-201ENST00000454878 894 ntBASIC13.78□□□□□ -0.2
VRK1Q99986 SERBP1P3-201ENST00000459980 809 ntBASIC13.78□□□□□ -0.2
VRK1Q99986 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
VRK1Q99986 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.78□□□□□ -0.2
VRK1Q99986 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.78□□□□□ -0.2
VRK1Q99986 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.78□□□□□ -0.2
VRK1Q99986 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.78□□□□□ -0.2
VRK1Q99986 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 AC027307.3-201ENST00000594262 1100 ntBASIC13.78□□□□□ -0.2
VRK1Q99986 AL365330.1-201ENST00000607459 531 ntBASIC13.78□□□□□ -0.2
VRK1Q99986 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.78□□□□□ -0.2
VRK1Q99986 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.78□□□□□ -0.2
VRK1Q99986 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
VRK1Q99986 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
VRK1Q99986 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.78□□□□□ -0.2
VRK1Q99986 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
VRK1Q99986 AC007292.2-201ENST00000593524 1812 ntBASIC13.78□□□□□ -0.2
VRK1Q99986 AC112504.1-201ENST00000623415 1841 ntBASIC13.78□□□□□ -0.2
VRK1Q99986 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
VRK1Q99986 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
VRK1Q99986 LINC02447-202ENST00000501888 2146 ntBASIC13.78□□□□□ -0.2
VRK1Q99986 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
VRK1Q99986 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VRK1Q99986 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VRK1Q99986 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VRK1Q99986 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
VRK1Q99986 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.77□□□□□ -0.2
VRK1Q99986 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
VRK1Q99986 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VRK1Q99986 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VRK1Q99986 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK1Q99986 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
VRK1Q99986 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK1Q99986 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK1Q99986 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK1Q99986 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.77□□□□□ -0.21
VRK1Q99986 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK1Q99986 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK1Q99986 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.77□□□□□ -0.21
VRK1Q99986 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK1Q99986 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK1Q99986 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK1Q99986 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VRK1Q99986 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
VRK1Q99986 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK1Q99986 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.77□□□□□ -0.21
VRK1Q99986 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.77□□□□□ -0.21
VRK1Q99986 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.77□□□□□ -0.21
VRK1Q99986 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.77□□□□□ -0.21
VRK1Q99986 CDC14C-201ENST00000428251 1719 ntBASIC13.77□□□□□ -0.21
VRK1Q99986 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.77□□□□□ -0.21
VRK1Q99986 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.77□□□□□ -0.21
VRK1Q99986 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK1Q99986 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK1Q99986 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
VRK1Q99986 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK1Q99986 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.77□□□□□ -0.21
VRK1Q99986 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK1Q99986 SSR4P1-203ENST00000599569 2260 ntBASIC13.77□□□□□ -0.21
VRK1Q99986 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VRK1Q99986 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
VRK1Q99986 AF228730.6-201ENST00000641497 218 ntBASIC13.77□□□□□ -0.21
VRK1Q99986 AC084121.3-201ENST00000641716 218 ntBASIC13.77□□□□□ -0.21
VRK1Q99986 AC105233.6-201ENST00000642093 218 ntBASIC13.77□□□□□ -0.21
VRK1Q99986 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK1Q99986 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK1Q99986 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
VRK1Q99986 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK1Q99986 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VRK1Q99986 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.77□□□□□ -0.21
VRK1Q99986 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
VRK1Q99986 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK1Q99986 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.76□□□□□ -0.21
VRK1Q99986 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms