Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 TIMM8BP1-201ENST00000452384 211 ntBASIC14.2□□□□□ -0.14
SNX18Q96RF0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.2□□□□□ -0.14
SNX18Q96RF0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SNX18Q96RF0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNX18Q96RF0 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.19□□□□□ -0.14
SNX18Q96RF0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNX18Q96RF0 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNX18Q96RF0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.19□□□□□ -0.14
SNX18Q96RF0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SNX18Q96RF0 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SNX18Q96RF0 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNX18Q96RF0 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SNX18Q96RF0 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.19□□□□□ -0.14
SNX18Q96RF0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SNX18Q96RF0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.19□□□□□ -0.14
SNX18Q96RF0 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNX18Q96RF0 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNX18Q96RF0 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNX18Q96RF0 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
SNX18Q96RF0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNX18Q96RF0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.19□□□□□ -0.14
SNX18Q96RF0 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNX18Q96RF0 AC004461.1-201ENST00000412461 403 ntBASIC14.19□□□□□ -0.14
SNX18Q96RF0 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.19□□□□□ -0.14
SNX18Q96RF0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.19□□□□□ -0.14
SNX18Q96RF0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SNX18Q96RF0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.19□□□□□ -0.14
SNX18Q96RF0 AC004449.1-201ENST00000564240 433 ntBASIC14.19□□□□□ -0.14
SNX18Q96RF0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.19□□□□□ -0.14
SNX18Q96RF0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.19□□□□□ -0.14
SNX18Q96RF0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.19□□□□□ -0.14
SNX18Q96RF0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.19□□□□□ -0.14
SNX18Q96RF0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.19□□□□□ -0.14
SNX18Q96RF0 AL513210.1-201ENST00000629608 234 ntBASIC14.19□□□□□ -0.14
SNX18Q96RF0 AC105339.1-204ENST00000636249 355 ntBASIC14.19□□□□□ -0.14
SNX18Q96RF0 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNX18Q96RF0 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNX18Q96RF0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.19□□□□□ -0.14
SNX18Q96RF0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SNX18Q96RF0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.19□□□□□ -0.14
SNX18Q96RF0 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SNX18Q96RF0 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
SNX18Q96RF0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SNX18Q96RF0 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SNX18Q96RF0 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SNX18Q96RF0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SNX18Q96RF0 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.18□□□□□ -0.14
SNX18Q96RF0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SNX18Q96RF0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms