Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 AC010491.1-201ENST00000563101 2797 ntBASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SYNGAP1Q96PV0 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SYNGAP1Q96PV0 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SYNGAP1Q96PV0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.52■□□□□ 0.39
SYNGAP1Q96PV0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SYNGAP1Q96PV0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.52■□□□□ 0.39
SYNGAP1Q96PV0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SYNGAP1Q96PV0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 RNU1-114P-201ENST00000365297 166 ntBASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 KLF2P2-201ENST00000416807 1039 ntBASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 NUS1P3-201ENST00000423502 862 ntBASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 AC007969.1-201ENST00000433675 447 ntBASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 AL590640.2-201ENST00000457038 527 ntBASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 RN7SL48P-201ENST00000579283 293 ntBASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 AL008638.5-201ENST00000623814 1298 ntBASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SYNGAP1Q96PV0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 MIR1202-201ENST00000408529 83 ntBASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 AC104306.2-201ENST00000451877 341 ntBASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 MIR4741-201ENST00000579822 90 ntBASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 EEF1DP1-201ENST00000585891 896 ntBASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SYNGAP1Q96PV0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms