Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.7□□□□□ -0.06
COL21A1Q96P44 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
COL21A1Q96P44 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COL21A1Q96P44 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
COL21A1Q96P44 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.69□□□□□ -0.06
COL21A1Q96P44 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
COL21A1Q96P44 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.69□□□□□ -0.06
COL21A1Q96P44 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
COL21A1Q96P44 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 AC100757.3-201ENST00000622361 1406 ntBASIC14.69□□□□□ -0.06
COL21A1Q96P44 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.69□□□□□ -0.06
COL21A1Q96P44 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.69□□□□□ -0.06
COL21A1Q96P44 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
COL21A1Q96P44 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
COL21A1Q96P44 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.69□□□□□ -0.06
COL21A1Q96P44 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.69□□□□□ -0.06
COL21A1Q96P44 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.69□□□□□ -0.06
COL21A1Q96P44 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.69□□□□□ -0.06
COL21A1Q96P44 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.69□□□□□ -0.06
COL21A1Q96P44 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.69□□□□□ -0.06
COL21A1Q96P44 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.69□□□□□ -0.06
COL21A1Q96P44 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.69□□□□□ -0.06
COL21A1Q96P44 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.69□□□□□ -0.06
COL21A1Q96P44 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
COL21A1Q96P44 AL033527.5-202ENST00000641632 1098 ntBASIC14.69□□□□□ -0.06
COL21A1Q96P44 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.69□□□□□ -0.06
COL21A1Q96P44 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.69□□□□□ -0.06
COL21A1Q96P44 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
COL21A1Q96P44 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
COL21A1Q96P44 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.69□□□□□ -0.06
COL21A1Q96P44 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL21A1Q96P44 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 AZGP1P1-201ENST00000411909 902 ntBASIC14.68□□□□□ -0.06
COL21A1Q96P44 BASP1P1-201ENST00000430708 665 ntBASIC14.68□□□□□ -0.06
COL21A1Q96P44 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 RN7SL618P-201ENST00000477850 296 ntBASIC14.68□□□□□ -0.06
COL21A1Q96P44 AC093214.1-201ENST00000511688 1107 ntBASIC14.68□□□□□ -0.06
COL21A1Q96P44 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 HNRNPUP1-201ENST00000554987 333 ntBASIC14.68□□□□□ -0.06
COL21A1Q96P44 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 AL590560.3-201ENST00000623350 461 ntBASIC14.68□□□□□ -0.06
COL21A1Q96P44 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms