Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 AC092933.1-201ENST00000393644 945 ntBASIC12.62□□□□□ -0.39
ZNF48Q96MX3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 RPL7P3-201ENST00000441388 714 ntBASIC12.62□□□□□ -0.39
ZNF48Q96MX3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 AL355864.2-201ENST00000447420 863 ntBASIC12.62□□□□□ -0.39
ZNF48Q96MX3 CSF2RBP1-201ENST00000447905 391 ntBASIC12.62□□□□□ -0.39
ZNF48Q96MX3 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 FTH1P14-201ENST00000482930 551 ntBASIC12.62□□□□□ -0.39
ZNF48Q96MX3 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF48Q96MX3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.61□□□□□ -0.39
ZNF48Q96MX3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 MIR1908-201ENST00000410394 80 ntBASIC12.61□□□□□ -0.39
ZNF48Q96MX3 BAATP1-201ENST00000412284 1225 ntBASIC12.61□□□□□ -0.39
ZNF48Q96MX3 ACTBP11-201ENST00000436287 1126 ntBASIC12.61□□□□□ -0.39
ZNF48Q96MX3 AC007551.1-201ENST00000457394 519 ntBASIC12.61□□□□□ -0.39
ZNF48Q96MX3 AC093433.1-201ENST00000458048 571 ntBASIC12.61□□□□□ -0.39
ZNF48Q96MX3 KRT18P43-201ENST00000469825 1281 ntBASIC12.61□□□□□ -0.39
ZNF48Q96MX3 AC106760.1-201ENST00000508690 800 ntBASIC12.61□□□□□ -0.39
ZNF48Q96MX3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 AC022532.1-201ENST00000624563 1728 ntBASIC12.61□□□□□ -0.39
ZNF48Q96MX3 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 PRAL-201ENST00000624952 3286 ntBASIC12.61□□□□□ -0.39
ZNF48Q96MX3 AC134312.5-201ENST00000568031 1313 ntBASIC12.61□□□□□ -0.39
ZNF48Q96MX3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.61□□□□□ -0.39
ZNF48Q96MX3 CICP14-201ENST00000629111 2732 ntBASIC12.61□□□□□ -0.39
ZNF48Q96MX3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms