Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RFT1Q96AA3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RFT1Q96AA3 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RFT1Q96AA3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RFT1Q96AA3 AC018892.3-201ENST00000623986 2499 ntBASIC13.8□□□□□ -0.2
RFT1Q96AA3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RFT1Q96AA3 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RFT1Q96AA3 PDPK2P-202ENST00000562415 1191 ntBASIC13.8□□□□□ -0.2
RFT1Q96AA3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 AC092865.6-201ENST00000642101 219 ntBASIC13.8□□□□□ -0.2
RFT1Q96AA3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RFT1Q96AA3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RFT1Q96AA3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RFT1Q96AA3 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RFT1Q96AA3 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RFT1Q96AA3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RFT1Q96AA3 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RFT1Q96AA3 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RFT1Q96AA3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RFT1Q96AA3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.8□□□□□ -0.2
RFT1Q96AA3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RFT1Q96AA3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RFT1Q96AA3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RFT1Q96AA3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RFT1Q96AA3 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RFT1Q96AA3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
RFT1Q96AA3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.79□□□□□ -0.2
RFT1Q96AA3 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RFT1Q96AA3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.79□□□□□ -0.2
RFT1Q96AA3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RFT1Q96AA3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RFT1Q96AA3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
RFT1Q96AA3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
RFT1Q96AA3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 AC002056.1-201ENST00000395613 760 ntBASIC13.79□□□□□ -0.2
RFT1Q96AA3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.79□□□□□ -0.2
RFT1Q96AA3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
RFT1Q96AA3 AL590627.1-203ENST00000421194 1026 ntBASIC13.79□□□□□ -0.2
RFT1Q96AA3 GPX1P2-201ENST00000429271 606 ntBASIC13.79□□□□□ -0.2
RFT1Q96AA3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
RFT1Q96AA3 AP002472.1-201ENST00000577490 586 ntBASIC13.79□□□□□ -0.2
RFT1Q96AA3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.79□□□□□ -0.2
RFT1Q96AA3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.79□□□□□ -0.2
RFT1Q96AA3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RFT1Q96AA3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.79□□□□□ -0.2
RFT1Q96AA3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.79□□□□□ -0.2
RFT1Q96AA3 ZBED1P1-201ENST00000502364 1930 ntBASIC13.79□□□□□ -0.2
RFT1Q96AA3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 AC023024.2-201ENST00000623561 1993 ntBASIC13.79□□□□□ -0.2
RFT1Q96AA3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.79□□□□□ -0.2
RFT1Q96AA3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
RFT1Q96AA3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
RFT1Q96AA3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.79□□□□□ -0.2
RFT1Q96AA3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.79□□□□□ -0.2
RFT1Q96AA3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFT1Q96AA3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms