Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AL353705.2-201ENST00000428243 662 ntBASIC13.96□□□□□ -0.17
PTP4A1Q93096 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.96□□□□□ -0.17
PTP4A1Q93096 TARDBPP1-201ENST00000442013 1203 ntBASIC13.96□□□□□ -0.17
PTP4A1Q93096 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.96□□□□□ -0.17
PTP4A1Q93096 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.96□□□□□ -0.17
PTP4A1Q93096 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
PTP4A1Q93096 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.96□□□□□ -0.17
PTP4A1Q93096 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
PTP4A1Q93096 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTP4A1Q93096 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.96□□□□□ -0.17
PTP4A1Q93096 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.96□□□□□ -0.17
PTP4A1Q93096 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.96□□□□□ -0.17
PTP4A1Q93096 AL133215.2-201ENST00000609242 977 ntBASIC13.96□□□□□ -0.17
PTP4A1Q93096 AL596442.2-201ENST00000610240 980 ntBASIC13.96□□□□□ -0.17
PTP4A1Q93096 AC018529.1-201ENST00000613063 361 ntBASIC13.96□□□□□ -0.17
PTP4A1Q93096 AL691403.2-201ENST00000618460 490 ntBASIC13.96□□□□□ -0.17
PTP4A1Q93096 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
PTP4A1Q93096 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.96□□□□□ -0.17
PTP4A1Q93096 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.18
PTP4A1Q93096 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
PTP4A1Q93096 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
PTP4A1Q93096 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.96□□□□□ -0.18
PTP4A1Q93096 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PTP4A1Q93096 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
PTP4A1Q93096 AP000845.1-201ENST00000581677 2131 ntBASIC13.96□□□□□ -0.18
PTP4A1Q93096 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PTP4A1Q93096 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
PTP4A1Q93096 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.96□□□□□ -0.18
PTP4A1Q93096 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
PTP4A1Q93096 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.95□□□□□ -0.18
PTP4A1Q93096 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.95□□□□□ -0.18
PTP4A1Q93096 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.95□□□□□ -0.18
PTP4A1Q93096 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
PTP4A1Q93096 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PTP4A1Q93096 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.95□□□□□ -0.18
PTP4A1Q93096 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.95□□□□□ -0.18
PTP4A1Q93096 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PTP4A1Q93096 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.95□□□□□ -0.18
PTP4A1Q93096 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.95□□□□□ -0.18
PTP4A1Q93096 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.95□□□□□ -0.18
PTP4A1Q93096 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.95□□□□□ -0.18
PTP4A1Q93096 RBPMS2P1-201ENST00000437762 623 ntBASIC13.95□□□□□ -0.18
PTP4A1Q93096 DNAJB3-202ENST00000449667 1266 ntBASIC13.95□□□□□ -0.18
PTP4A1Q93096 AC023141.5-201ENST00000458585 616 ntBASIC13.95□□□□□ -0.18
PTP4A1Q93096 AC093520.2-201ENST00000561830 333 ntBASIC13.95□□□□□ -0.18
PTP4A1Q93096 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
PTP4A1Q93096 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.95□□□□□ -0.18
PTP4A1Q93096 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.95□□□□□ -0.18
PTP4A1Q93096 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.95□□□□□ -0.18
PTP4A1Q93096 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.95□□□□□ -0.18
PTP4A1Q93096 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
PTP4A1Q93096 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.95□□□□□ -0.18
PTP4A1Q93096 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PTP4A1Q93096 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PTP4A1Q93096 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTP4A1Q93096 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTP4A1Q93096 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTP4A1Q93096 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTP4A1Q93096 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PTP4A1Q93096 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PTP4A1Q93096 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTP4A1Q93096 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTP4A1Q93096 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.94□□□□□ -0.18
PTP4A1Q93096 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms