Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 KRT18P9-201ENST00000604826 1300 ntBASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 AC026470.1-201ENST00000478038 846 ntBASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 RN7SL846P-201ENST00000467429 292 ntBASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 RN7SL470P-201ENST00000583069 259 ntBASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 AP005212.2-201ENST00000584979 510 ntBASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
PRUNE2Q8WUY3 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 AC010900.1-201ENST00000449849 1296 ntBASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 PSME2-217ENST00000615264 874 ntTSL 5 BASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 PSME2-218ENST00000630027 185 ntTSL 3 BASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 AC011270.2-201ENST00000624293 2550 ntBASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 RN7SL494P-201ENST00000461517 304 ntBASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 LINC01783-202ENST00000614408 828 ntBASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 BX284668.2-205ENST00000619677 828 ntBASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 AC025183.3-201ENST00000623526 1482 ntBASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.71■□□□□ 0.11
PRUNE2Q8WUY3 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PRUNE2Q8WUY3 AP000358.1-201ENST00000456260 156 ntBASIC15.71■□□□□ 0.1
PRUNE2Q8WUY3 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC15.71■□□□□ 0.1
PRUNE2Q8WUY3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.71■□□□□ 0.1
PRUNE2Q8WUY3 AC005962.1-201ENST00000584100 773 ntBASIC15.71■□□□□ 0.1
PRUNE2Q8WUY3 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC15.71■□□□□ 0.1
PRUNE2Q8WUY3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.71■□□□□ 0.1
PRUNE2Q8WUY3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PRUNE2Q8WUY3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.71■□□□□ 0.1
PRUNE2Q8WUY3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRUNE2Q8WUY3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
PRUNE2Q8WUY3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PRUNE2Q8WUY3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRUNE2Q8WUY3 RPL14-203ENST00000416518 812 ntTSL 3 BASIC15.7■□□□□ 0.1
PRUNE2Q8WUY3 AC106047.2-201ENST00000511723 743 ntBASIC15.7■□□□□ 0.1
PRUNE2Q8WUY3 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRUNE2Q8WUY3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRUNE2Q8WUY3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRUNE2Q8WUY3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRUNE2Q8WUY3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
PRUNE2Q8WUY3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.7■□□□□ 0.1
PRUNE2Q8WUY3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRUNE2Q8WUY3 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRUNE2Q8WUY3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PRUNE2Q8WUY3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.7■□□□□ 0.1
PRUNE2Q8WUY3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRUNE2Q8WUY3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRUNE2Q8WUY3 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRUNE2Q8WUY3 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms