Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 ATF5-205ENST00000600336 682 ntTSL 2 BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMC1Q8TDI8 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 AC005229.1-201ENST00000392885 409 ntBASIC21.5■■□□□ 1.03
TMC1Q8TDI8 MPV17-208ENST00000405076 603 ntTSL 5 BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 AL355864.2-201ENST00000447420 863 ntBASIC21.5■■□□□ 1.03
TMC1Q8TDI8 KLF2P4-201ENST00000451959 1225 ntBASIC21.5■■□□□ 1.03
TMC1Q8TDI8 BNIP3P42-201ENST00000454982 569 ntBASIC21.5■■□□□ 1.03
TMC1Q8TDI8 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 APRT-204ENST00000563655 709 ntTSL 5 BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 IFT20-206ENST00000578122 834 ntTSL 2 BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 IFT20-208ENST00000578985 831 ntTSL 3 BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 BNIP3P29-201ENST00000598302 571 ntBASIC21.5■■□□□ 1.03
TMC1Q8TDI8 AC011447.5-201ENST00000616168 564 ntBASIC21.5■■□□□ 1.03
TMC1Q8TDI8 PFAS-212ENST00000625942 396 ntTSL 5 BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 AC093525.8-201ENST00000624099 1342 ntBASIC21.5■■□□□ 1.03
TMC1Q8TDI8 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMC1Q8TDI8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 AC105250.1-201ENST00000509378 2057 ntBASIC21.49■■□□□ 1.03
TMC1Q8TDI8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 ILF3-AS1-201ENST00000591501 1983 ntBASIC21.49■■□□□ 1.03
TMC1Q8TDI8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 AC106760.1-201ENST00000508690 800 ntBASIC21.49■■□□□ 1.03
TMC1Q8TDI8 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 AC093813.1-201ENST00000605066 256 ntBASIC21.49■■□□□ 1.03
TMC1Q8TDI8 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 AC126177.1-201ENST00000547829 2218 ntBASIC21.49■■□□□ 1.03
TMC1Q8TDI8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMC1Q8TDI8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms