Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
FNDC9Q8TBE3 PCDHA3-202ENST00000532566 4594 ntBASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
FNDC9Q8TBE3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 CICP13-201ENST00000422015 2789 ntBASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 AC092127.1-201ENST00000567093 3455 ntBASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 SBF1P1-201ENST00000444527 5631 ntBASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 AL512384.1-201ENST00000406683 331 ntBASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
FNDC9Q8TBE3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms