Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 MIR4783-201ENST00000580343 82 ntBASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC168Q8NDH2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 COX20P1-201ENST00000366529 357 ntBASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 AL357373.1-201ENST00000394974 322 ntBASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 TMCO5B-205ENST00000530020 894 ntBASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 AC012158.2-201ENST00000536546 354 ntBASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 OR10B1P-201ENST00000601666 907 ntBASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 RNF165-205ENST00000588679 2904 ntBASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 AC114812.1-204ENST00000449669 728 ntBASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC168Q8NDH2 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 KRT8P29-201ENST00000420409 1371 ntBASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 AC009093.2-202ENST00000620513 2079 ntBASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 AC020916.1-201ENST00000587762 1774 ntBASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCDC168Q8NDH2 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms