Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00311Q8N616 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00311Q8N616 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.52□□□□□ -0.4
LINC00311Q8N616 AL138799.1-201ENST00000448213 1675 ntBASIC12.52□□□□□ -0.4
LINC00311Q8N616 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00311Q8N616 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC00311Q8N616 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
LINC00311Q8N616 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00311Q8N616 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00311Q8N616 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00311Q8N616 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00311Q8N616 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00311Q8N616 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC00311Q8N616 VDAC1P7-201ENST00000462417 847 ntBASIC12.52□□□□□ -0.41
LINC00311Q8N616 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC00311Q8N616 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00311Q8N616 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.52□□□□□ -0.41
LINC00311Q8N616 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC00311Q8N616 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00311Q8N616 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00311Q8N616 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00311Q8N616 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00311Q8N616 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00311Q8N616 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00311Q8N616 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
LINC00311Q8N616 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00311Q8N616 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC00311Q8N616 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00311Q8N616 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00311Q8N616 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00311Q8N616 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
LINC00311Q8N616 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00311Q8N616 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00311Q8N616 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00311Q8N616 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00311Q8N616 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00311Q8N616 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC00311Q8N616 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00311Q8N616 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC00311Q8N616 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
LINC00311Q8N616 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00311Q8N616 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 AC134915.1-201ENST00000426461 574 ntBASIC12.51□□□□□ -0.41
LINC00311Q8N616 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 BCRP1-201ENST00000444246 691 ntBASIC12.51□□□□□ -0.41
LINC00311Q8N616 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00311Q8N616 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00311Q8N616 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms