Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 AL662890.1-201ENST00000396818 632 ntBASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 KLF2P2-201ENST00000416807 1039 ntBASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SYNPOQ8N3V7 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 MIR663B-201ENST00000408361 115 ntBASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SYNPOQ8N3V7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 AL603832.2-201ENST00000566195 2125 ntBASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNPOQ8N3V7 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms