Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 AC005229.1-201ENST00000392885 409 ntBASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 BOLA2P3-201ENST00000404566 256 ntBASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 AC106760.1-201ENST00000508690 800 ntBASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 AC104989.1-201ENST00000519711 778 ntBASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 AC133552.6-201ENST00000613406 534 ntBASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCN4BQ8IWT1 PDIA3P1-201ENST00000471856 1510 ntBASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 ACKR1-201ENST00000368121 1240 ntBASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 AC007274.1-201ENST00000439805 662 ntBASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 CTBP2P5-201ENST00000454986 1264 ntBASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCN4BQ8IWT1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 AC105250.1-201ENST00000509378 2057 ntBASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms