Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 AC026471.1-201ENST00000564629 3026 ntBASIC12.7□□□□□ -0.38
CSMD2Q7Z408 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.7□□□□□ -0.38
CSMD2Q7Z408 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 AL137783.1-201ENST00000623494 1896 ntBASIC12.69□□□□□ -0.38
CSMD2Q7Z408 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 ENPP7P8-202ENST00000527856 1345 ntBASIC12.69□□□□□ -0.38
CSMD2Q7Z408 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 CICP13-201ENST00000422015 2789 ntBASIC12.69□□□□□ -0.38
CSMD2Q7Z408 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 PHBP15-201ENST00000574228 665 ntBASIC12.69□□□□□ -0.38
CSMD2Q7Z408 NUDT4P2-201ENST00000578341 546 ntBASIC12.69□□□□□ -0.38
CSMD2Q7Z408 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
CSMD2Q7Z408 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 FAM58BP-201ENST00000439056 645 ntBASIC12.68□□□□□ -0.38
CSMD2Q7Z408 PUDPP3-201ENST00000445368 636 ntBASIC12.68□□□□□ -0.38
CSMD2Q7Z408 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 DUX4L47-201ENST00000566374 394 ntBASIC12.68□□□□□ -0.38
CSMD2Q7Z408 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms