Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3BQ7Z3V4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 OLR1-203ENST00000432556 950 ntTSL 2 BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 RNA5SP486-201ENST00000515961 83 ntBASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 TUBB1P2-201ENST00000422712 1306 ntBASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 TUBB1P1-201ENST00000503144 1300 ntBASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 AL359258.3-201ENST00000622910 2331 ntBASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.17■□□□□ 0.66
UBE3BQ7Z3V4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 AC132872.4-202ENST00000622924 2756 ntBASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 HLA-K-203ENST00000430151 1046 ntBASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 AL355994.2-201ENST00000447882 704 ntBASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 MIR4538-201ENST00000581377 78 ntBASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 AC010328.2-201ENST00000597698 1111 ntBASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 REXO1L5P-201ENST00000622260 2098 ntBASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 MST1L-201ENST00000442552 2185 ntBASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3BQ7Z3V4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 AL157414.3-201ENST00000624276 1954 ntBASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3BQ7Z3V4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms