Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 AC120045.2-201ENST00000567334 178 ntBASIC14.86□□□□□ -0.03
RNF44Q7L0R7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 AC025181.2-201ENST00000606994 802 ntBASIC14.86□□□□□ -0.03
RNF44Q7L0R7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 AC020658.6-201ENST00000623564 1870 ntBASIC14.86□□□□□ -0.03
RNF44Q7L0R7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 AC092850.2-201ENST00000623821 2697 ntBASIC14.86□□□□□ -0.03
RNF44Q7L0R7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF44Q7L0R7 AC090616.6-203ENST00000579186 1945 ntBASIC14.86□□□□□ -0.03
RNF44Q7L0R7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.85□□□□□ -0.03
RNF44Q7L0R7 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 DRD5P1-201ENST00000456605 1438 ntBASIC14.85□□□□□ -0.03
RNF44Q7L0R7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 RPL5P21-201ENST00000404620 815 ntBASIC14.85□□□□□ -0.03
RNF44Q7L0R7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 NME2P1-201ENST00000426182 414 ntBASIC14.85□□□□□ -0.03
RNF44Q7L0R7 RN7SL752P-201ENST00000463779 287 ntBASIC14.85□□□□□ -0.03
RNF44Q7L0R7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 AL359711.2-201ENST00000563105 872 ntBASIC14.85□□□□□ -0.03
RNF44Q7L0R7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 AC133539.2-201ENST00000604757 467 ntBASIC14.85□□□□□ -0.03
RNF44Q7L0R7 AC107373.2-201ENST00000607735 490 ntBASIC14.85□□□□□ -0.03
RNF44Q7L0R7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF44Q7L0R7 MYO15B-237ENST00000642007 4893 ntBASIC14.84□□□□□ -0.03
RNF44Q7L0R7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 C1QBPP1-201ENST00000400117 770 ntBASIC14.84□□□□□ -0.03
RNF44Q7L0R7 SOCS2P1-201ENST00000417727 557 ntBASIC14.84□□□□□ -0.03
RNF44Q7L0R7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms