Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 AC092978.1-202ENST00000637590 1327 ntBASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 AL359258.3-201ENST00000622910 2331 ntBASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 API5-202ENST00000420461 2009 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 AL513523.2-202ENST00000427283 2040 ntBASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 IGF1-203ENST00000392904 761 ntTSL 5 BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 AC078875.1-201ENST00000431907 724 ntBASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 AC069218.1-201ENST00000435269 762 ntBASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 MEG3_2.1-201ENST00000611456 105 ntBASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC141Q6ZP82 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 HNRNPA1P41-201ENST00000397777 928 ntBASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 TLE1P1-201ENST00000422965 589 ntBASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 AC253536.4-201ENST00000440539 267 ntBASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 LDHBP1-201ENST00000455730 1119 ntBASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 AC090857.1-201ENST00000527400 390 ntBASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 AC005962.1-201ENST00000584100 773 ntBASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 AMT-204ENST00000427987 1646 ntTSL 5 BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC141Q6ZP82 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 FADS2-212ENST00000522639 360 ntTSL 5 BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 FADS2-215ENST00000574708 385 ntTSL 3 BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 MIR5572-201ENST00000583188 137 ntBASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 AC008825.2-201ENST00000603374 718 ntBASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC141Q6ZP82 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms