Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.02□□□□□ -0.17
RTL6Q6ICC9 MIR6799-201ENST00000620297 69 ntBASIC14.02□□□□□ -0.17
RTL6Q6ICC9 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.02□□□□□ -0.17
RTL6Q6ICC9 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.01□□□□□ -0.17
RTL6Q6ICC9 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 BOLA2P3-201ENST00000404566 256 ntBASIC14.01□□□□□ -0.17
RTL6Q6ICC9 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 KRT43P-201ENST00000434019 910 ntBASIC14.01□□□□□ -0.17
RTL6Q6ICC9 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 VDAC1P7-201ENST00000462417 847 ntBASIC14.01□□□□□ -0.17
RTL6Q6ICC9 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 AC104989.1-201ENST00000519711 778 ntBASIC14.01□□□□□ -0.17
RTL6Q6ICC9 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 ENPP7P5-201ENST00000541031 1031 ntBASIC14.01□□□□□ -0.17
RTL6Q6ICC9 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 AC120045.2-201ENST00000567334 178 ntBASIC14.01□□□□□ -0.17
RTL6Q6ICC9 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 PCDHA3-202ENST00000532566 4594 ntBASIC14.01□□□□□ -0.17
RTL6Q6ICC9 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTL6Q6ICC9 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTL6Q6ICC9 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
RTL6Q6ICC9 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14□□□□□ -0.17
RTL6Q6ICC9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTL6Q6ICC9 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14□□□□□ -0.17
RTL6Q6ICC9 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTL6Q6ICC9 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
RTL6Q6ICC9 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTL6Q6ICC9 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTL6Q6ICC9 SUPT20HL2-201ENST00000486479 2409 ntBASIC14□□□□□ -0.17
RTL6Q6ICC9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14□□□□□ -0.17
RTL6Q6ICC9 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14□□□□□ -0.17
RTL6Q6ICC9 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14□□□□□ -0.17
RTL6Q6ICC9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14□□□□□ -0.17
RTL6Q6ICC9 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14□□□□□ -0.17
RTL6Q6ICC9 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RTL6Q6ICC9 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14□□□□□ -0.17
RTL6Q6ICC9 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14□□□□□ -0.17
RTL6Q6ICC9 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14□□□□□ -0.17
RTL6Q6ICC9 RPL13AP25-201ENST00000484130 612 ntBASIC14□□□□□ -0.17
RTL6Q6ICC9 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14□□□□□ -0.17
RTL6Q6ICC9 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14□□□□□ -0.17
RTL6Q6ICC9 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14□□□□□ -0.17
RTL6Q6ICC9 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14□□□□□ -0.17
RTL6Q6ICC9 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14□□□□□ -0.17
RTL6Q6ICC9 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14□□□□□ -0.17
RTL6Q6ICC9 AC000095.1-201ENST00000603208 874 ntBASIC14□□□□□ -0.17
RTL6Q6ICC9 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14□□□□□ -0.17
RTL6Q6ICC9 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14□□□□□ -0.17
RTL6Q6ICC9 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms