Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 TMEM14EP-202ENST00000639378 1296 ntBASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 PFN1P12-201ENST00000455938 534 ntBASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 AC099548.2-209ENST00000480264 625 ntBASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 AC244093.1-201ENST00000610837 814 ntBASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 AC091271.1-201ENST00000611877 1162 ntBASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RNFT1Q5M7Z0 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 C2orf69P2-201ENST00000562032 1123 ntBASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.86□□□□□ -0.19
RNFT1Q5M7Z0 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms