Protein–RNA interactions for Protein: Q08623

PUDP, Pseudouridine-5'-phosphatase, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPQ08623 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 ST20-AS1-201ENST00000560255 4223 ntBASIC14.2□□□□□ -0.14
PUDPQ08623 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PUDPQ08623 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PUDPQ08623 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.2□□□□□ -0.14
PUDPQ08623 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.2□□□□□ -0.14
PUDPQ08623 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
PUDPQ08623 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PUDPQ08623 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.2□□□□□ -0.14
PUDPQ08623 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
PUDPQ08623 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.2□□□□□ -0.14
PUDPQ08623 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.2□□□□□ -0.14
PUDPQ08623 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
PUDPQ08623 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.2□□□□□ -0.14
PUDPQ08623 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.2□□□□□ -0.14
PUDPQ08623 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PUDPQ08623 AC025678.2-201ENST00000562061 970 ntBASIC14.2□□□□□ -0.14
PUDPQ08623 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.2□□□□□ -0.14
PUDPQ08623 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.2□□□□□ -0.14
PUDPQ08623 AC097359.3-201ENST00000603982 1210 ntBASIC14.2□□□□□ -0.14
PUDPQ08623 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
PUDPQ08623 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PUDPQ08623 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PUDPQ08623 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PUDPQ08623 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PUDPQ08623 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.2□□□□□ -0.14
PUDPQ08623 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PUDPQ08623 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.19□□□□□ -0.14
PUDPQ08623 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.19□□□□□ -0.14
PUDPQ08623 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.19□□□□□ -0.14
PUDPQ08623 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.19□□□□□ -0.14
PUDPQ08623 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.19□□□□□ -0.14
PUDPQ08623 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.19□□□□□ -0.14
PUDPQ08623 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PUDPQ08623 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 AL139400.1-201ENST00000366220 510 ntBASIC14.19□□□□□ -0.14
PUDPQ08623 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.19□□□□□ -0.14
PUDPQ08623 HIST3H2BA-201ENST00000436555 524 ntBASIC14.19□□□□□ -0.14
PUDPQ08623 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.19□□□□□ -0.14
PUDPQ08623 SERBP1P3-201ENST00000459980 809 ntBASIC14.19□□□□□ -0.14
PUDPQ08623 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.19□□□□□ -0.14
PUDPQ08623 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.19□□□□□ -0.14
PUDPQ08623 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.19□□□□□ -0.14
PUDPQ08623 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.19□□□□□ -0.14
PUDPQ08623 AC004449.1-201ENST00000564240 433 ntBASIC14.19□□□□□ -0.14
PUDPQ08623 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.19□□□□□ -0.14
PUDPQ08623 AP001160.2-201ENST00000596071 487 ntBASIC14.19□□□□□ -0.14
PUDPQ08623 Z92544.3-201ENST00000624747 417 ntBASIC14.19□□□□□ -0.14
PUDPQ08623 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 AC127383.1-201ENST00000444697 1800 ntBASIC14.19□□□□□ -0.14
PUDPQ08623 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PUDPQ08623 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.19□□□□□ -0.14
PUDPQ08623 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PUDPQ08623 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PUDPQ08623 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms