Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC10.79□□□□□ -0.68
PRKDCP78527 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC10.79□□□□□ -0.68
PRKDCP78527 NME6-208ENST00000435684 599 ntTSL 2 BASIC10.79□□□□□ -0.68
PRKDCP78527 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC10.79□□□□□ -0.68
PRKDCP78527 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC10.79□□□□□ -0.68
PRKDCP78527 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 AC133540.1-201ENST00000620845 1019 ntBASIC10.79□□□□□ -0.68
PRKDCP78527 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
PRKDCP78527 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 AP001094.4-201ENST00000579008 2176 ntBASIC10.79□□□□□ -0.68
PRKDCP78527 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC10.79□□□□□ -0.68
PRKDCP78527 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC10.79□□□□□ -0.68
PRKDCP78527 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
PRKDCP78527 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC10.79□□□□□ -0.68
PRKDCP78527 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC10.79□□□□□ -0.68
PRKDCP78527 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
PRKDCP78527 AC021321.1-201ENST00000607397 1113 ntBASIC10.79□□□□□ -0.68
PRKDCP78527 AP006248.1-201ENST00000610471 67 ntBASIC10.79□□□□□ -0.68
PRKDCP78527 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
PRKDCP78527 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC10.79□□□□□ -0.68
PRKDCP78527 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC10.79□□□□□ -0.68
PRKDCP78527 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC10.79□□□□□ -0.68
PRKDCP78527 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
PRKDCP78527 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
PRKDCP78527 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC10.79□□□□□ -0.68
PRKDCP78527 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC10.79□□□□□ -0.68
PRKDCP78527 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 SIGLEC20P-201ENST00000595243 1311 ntBASIC10.79□□□□□ -0.68
PRKDCP78527 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC10.79□□□□□ -0.68
PRKDCP78527 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC10.79□□□□□ -0.68
PRKDCP78527 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 KRT8P30-201ENST00000432100 650 ntBASIC10.79□□□□□ -0.68
PRKDCP78527 SOD2-205ENST00000444946 917 ntTSL 2 BASIC10.79□□□□□ -0.68
PRKDCP78527 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC10.79□□□□□ -0.68
PRKDCP78527 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC10.79□□□□□ -0.68
PRKDCP78527 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC10.79□□□□□ -0.68
PRKDCP78527 TRMT112P3-201ENST00000580149 358 ntBASIC10.79□□□□□ -0.68
PRKDCP78527 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
PRKDCP78527 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PRKDCP78527 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC10.79□□□□□ -0.68
PRKDCP78527 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
PRKDCP78527 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC10.78□□□□□ -0.68
PRKDCP78527 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PRKDCP78527 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC10.78□□□□□ -0.68
PRKDCP78527 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
PRKDCP78527 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC10.78□□□□□ -0.68
PRKDCP78527 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
PRKDCP78527 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
PRKDCP78527 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC10.78□□□□□ -0.68
PRKDCP78527 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PRKDCP78527 AL160191.2-201ENST00000603975 601 ntBASIC10.78□□□□□ -0.68
PRKDCP78527 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC10.78□□□□□ -0.68
PRKDCP78527 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
PRKDCP78527 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PRKDCP78527 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
PRKDCP78527 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC10.78□□□□□ -0.68
PRKDCP78527 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PRKDCP78527 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PRKDCP78527 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PRKDCP78527 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PRKDCP78527 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PRKDCP78527 MIR1301-201ENST00000408518 82 ntBASIC10.78□□□□□ -0.68
PRKDCP78527 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC10.78□□□□□ -0.68
PRKDCP78527 AC092862.1-201ENST00000541534 533 ntBASIC10.78□□□□□ -0.68
PRKDCP78527 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC10.78□□□□□ -0.68
PRKDCP78527 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC10.78□□□□□ -0.68
PRKDCP78527 AC010976.2-201ENST00000609697 852 ntBASIC10.78□□□□□ -0.68
PRKDCP78527 AC015912.3-201ENST00000619432 348 ntBASIC10.78□□□□□ -0.68
PRKDCP78527 AC092299.1-201ENST00000632679 757 ntBASIC10.78□□□□□ -0.68
PRKDCP78527 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC10.78□□□□□ -0.68
PRKDCP78527 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
PRKDCP78527 PGR-209ENST00000617858 2816 ntTSL 5 BASIC10.78□□□□□ -0.68
PRKDCP78527 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
PRKDCP78527 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PRKDCP78527 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC10.78□□□□□ -0.68
PRKDCP78527 FAU-201ENST00000279259 461 ntTSL 2 BASIC10.78□□□□□ -0.68
PRKDCP78527 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PRKDCP78527 AC027612.2-202ENST00000445955 1199 ntBASIC10.78□□□□□ -0.68
PRKDCP78527 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms