Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ACTA1P68133 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ACTA1P68133 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ACTA1P68133 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ACTA1P68133 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ACTA1P68133 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ACTA1P68133 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ACTA1P68133 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.86□□□□□ -0.19
ACTA1P68133 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
ACTA1P68133 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.85□□□□□ -0.19
ACTA1P68133 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
ACTA1P68133 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
ACTA1P68133 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
ACTA1P68133 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.85□□□□□ -0.19
ACTA1P68133 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.85□□□□□ -0.19
ACTA1P68133 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.85□□□□□ -0.19
ACTA1P68133 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.85□□□□□ -0.19
ACTA1P68133 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.85□□□□□ -0.19
ACTA1P68133 SLC25A1P1-201ENST00000528351 927 ntBASIC13.85□□□□□ -0.19
ACTA1P68133 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.85□□□□□ -0.19
ACTA1P68133 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.85□□□□□ -0.19
ACTA1P68133 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.85□□□□□ -0.19
ACTA1P68133 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.85□□□□□ -0.19
ACTA1P68133 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
ACTA1P68133 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.85□□□□□ -0.19
ACTA1P68133 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.85□□□□□ -0.19
ACTA1P68133 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
ACTA1P68133 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
ACTA1P68133 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ACTA1P68133 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ACTA1P68133 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ACTA1P68133 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
ACTA1P68133 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.84□□□□□ -0.19
ACTA1P68133 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ACTA1P68133 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ACTA1P68133 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
ACTA1P68133 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ACTA1P68133 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ACTA1P68133 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ACTA1P68133 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ACTA1P68133 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ACTA1P68133 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.84□□□□□ -0.19
ACTA1P68133 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
ACTA1P68133 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ACTA1P68133 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
ACTA1P68133 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ACTA1P68133 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
ACTA1P68133 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.84□□□□□ -0.19
ACTA1P68133 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.84□□□□□ -0.19
ACTA1P68133 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ACTA1P68133 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
ACTA1P68133 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ACTA1P68133 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.84□□□□□ -0.19
ACTA1P68133 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.84□□□□□ -0.19
ACTA1P68133 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ACTA1P68133 FO393414.2-201ENST00000405153 598 ntBASIC13.84□□□□□ -0.19
ACTA1P68133 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ACTA1P68133 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.84□□□□□ -0.19
ACTA1P68133 SPCS2P4-201ENST00000436160 681 ntBASIC13.84□□□□□ -0.19
ACTA1P68133 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.84□□□□□ -0.19
ACTA1P68133 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ACTA1P68133 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.84□□□□□ -0.19
ACTA1P68133 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.84□□□□□ -0.19
ACTA1P68133 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.84□□□□□ -0.19
ACTA1P68133 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.84□□□□□ -0.19
ACTA1P68133 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.84□□□□□ -0.19
ACTA1P68133 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ACTA1P68133 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.84□□□□□ -0.19
ACTA1P68133 AC106730.1-201ENST00000566722 1090 ntBASIC13.84□□□□□ -0.19
ACTA1P68133 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.84□□□□□ -0.19
ACTA1P68133 AC026120.1-201ENST00000611536 926 ntBASIC13.84□□□□□ -0.19
ACTA1P68133 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.84□□□□□ -0.19
ACTA1P68133 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
ACTA1P68133 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms