Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SUMO3P55854 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.98□□□□□ -0.17
SUMO3P55854 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SUMO3P55854 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SUMO3P55854 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SUMO3P55854 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SUMO3P55854 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SUMO3P55854 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SUMO3P55854 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.98□□□□□ -0.17
SUMO3P55854 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.98□□□□□ -0.17
SUMO3P55854 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SUMO3P55854 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SUMO3P55854 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SUMO3P55854 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SUMO3P55854 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.98□□□□□ -0.17
SUMO3P55854 AC098850.1-201ENST00000419919 790 ntBASIC13.98□□□□□ -0.17
SUMO3P55854 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.98□□□□□ -0.17
SUMO3P55854 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SUMO3P55854 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.98□□□□□ -0.17
SUMO3P55854 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SUMO3P55854 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SUMO3P55854 MIR3197-201ENST00000582241 73 ntBASIC13.98□□□□□ -0.17
SUMO3P55854 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
SUMO3P55854 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SUMO3P55854 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SUMO3P55854 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.98□□□□□ -0.17
SUMO3P55854 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SUMO3P55854 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SUMO3P55854 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
SUMO3P55854 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SUMO3P55854 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.98□□□□□ -0.17
SUMO3P55854 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SUMO3P55854 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SUMO3P55854 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.98□□□□□ -0.17
SUMO3P55854 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
SUMO3P55854 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SUMO3P55854 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
SUMO3P55854 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.98□□□□□ -0.17
SUMO3P55854 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SUMO3P55854 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SUMO3P55854 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SUMO3P55854 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SUMO3P55854 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SUMO3P55854 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SUMO3P55854 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SUMO3P55854 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.97□□□□□ -0.17
SUMO3P55854 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.97□□□□□ -0.17
SUMO3P55854 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SUMO3P55854 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.97□□□□□ -0.17
SUMO3P55854 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SUMO3P55854 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.97□□□□□ -0.17
SUMO3P55854 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
SUMO3P55854 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SUMO3P55854 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
SUMO3P55854 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SUMO3P55854 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SUMO3P55854 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SUMO3P55854 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SUMO3P55854 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SUMO3P55854 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SUMO3P55854 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SUMO3P55854 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.97□□□□□ -0.17
SUMO3P55854 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.97□□□□□ -0.17
SUMO3P55854 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.97□□□□□ -0.17
SUMO3P55854 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.97□□□□□ -0.17
SUMO3P55854 AL359711.2-201ENST00000563105 872 ntBASIC13.97□□□□□ -0.17
SUMO3P55854 AC138761.1-201ENST00000584393 385 ntBASIC13.97□□□□□ -0.17
SUMO3P55854 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.97□□□□□ -0.17
SUMO3P55854 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.97□□□□□ -0.17
SUMO3P55854 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SUMO3P55854 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SUMO3P55854 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SUMO3P55854 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.97□□□□□ -0.17
SUMO3P55854 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
SUMO3P55854 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SUMO3P55854 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.97□□□□□ -0.17
SUMO3P55854 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SUMO3P55854 ZBED1P1-201ENST00000502364 1930 ntBASIC13.97□□□□□ -0.17
SUMO3P55854 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.97□□□□□ -0.17
SUMO3P55854 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SUMO3P55854 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SUMO3P55854 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
SUMO3P55854 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SUMO3P55854 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SUMO3P55854 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SUMO3P55854 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SUMO3P55854 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SUMO3P55854 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SUMO3P55854 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.97□□□□□ -0.17
SUMO3P55854 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.97□□□□□ -0.17
SUMO3P55854 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SUMO3P55854 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SUMO3P55854 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SUMO3P55854 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SUMO3P55854 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SUMO3P55854 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SUMO3P55854 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SUMO3P55854 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SUMO3P55854 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SUMO3P55854 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms