Protein–RNA interactions for Protein: P55773

CCL23, C-C motif chemokine 23, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL23P55773 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CCL23P55773 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL23P55773 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCL23P55773 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL23P55773 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CCL23P55773 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL23P55773 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL23P55773 AL136309.1-201ENST00000403917 691 ntBASIC16.66■□□□□ 0.26
CCL23P55773 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.66■□□□□ 0.26
CCL23P55773 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.66■□□□□ 0.26
CCL23P55773 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.66■□□□□ 0.26
CCL23P55773 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL23P55773 MIR3147-201ENST00000577811 66 ntBASIC16.66■□□□□ 0.26
CCL23P55773 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL23P55773 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL23P55773 AL805961.1-203ENST00000641078 1258 ntBASIC16.66■□□□□ 0.26
CCL23P55773 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL23P55773 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL23P55773 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.66■□□□□ 0.26
CCL23P55773 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL23P55773 CLUHP2-201ENST00000426660 1303 ntBASIC16.66■□□□□ 0.26
CCL23P55773 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CCL23P55773 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCL23P55773 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL23P55773 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL23P55773 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL23P55773 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL23P55773 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL23P55773 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.65■□□□□ 0.26
CCL23P55773 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 AC004899.1-201ENST00000424687 1714 ntBASIC16.65■□□□□ 0.26
CCL23P55773 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CCL23P55773 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.65■□□□□ 0.26
CCL23P55773 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL23P55773 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.65■□□□□ 0.26
CCL23P55773 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CCL23P55773 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 AL161670.2-201ENST00000557650 1227 ntBASIC16.65■□□□□ 0.26
CCL23P55773 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.65■□□□□ 0.26
CCL23P55773 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.65■□□□□ 0.26
CCL23P55773 SAMD11P1-201ENST00000571429 661 ntBASIC16.65■□□□□ 0.26
CCL23P55773 RN7SL163P-201ENST00000583100 276 ntBASIC16.65■□□□□ 0.26
CCL23P55773 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.65■□□□□ 0.26
CCL23P55773 AC138466.3-201ENST00000619983 221 ntBASIC16.65■□□□□ 0.26
CCL23P55773 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL23P55773 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL23P55773 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.65■□□□□ 0.26
CCL23P55773 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCL23P55773 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCL23P55773 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL23P55773 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL23P55773 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CCL23P55773 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
CCL23P55773 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL23P55773 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL23P55773 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL23P55773 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCL23P55773 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL23P55773 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL23P55773 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CCL23P55773 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL23P55773 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCL23P55773 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CCL23P55773 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCL23P55773 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCL23P55773 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.64■□□□□ 0.25
CCL23P55773 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.64■□□□□ 0.25
CCL23P55773 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.64■□□□□ 0.25
CCL23P55773 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.64■□□□□ 0.25
CCL23P55773 MIR4683-201ENST00000579659 81 ntBASIC16.64■□□□□ 0.25
CCL23P55773 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL23P55773 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL23P55773 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.64■□□□□ 0.25
CCL23P55773 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.64■□□□□ 0.25
CCL23P55773 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.64■□□□□ 0.25
CCL23P55773 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.64■□□□□ 0.25
CCL23P55773 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCL23P55773 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCL23P55773 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms