Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A3P43003 AC126365.1-201ENST00000578585 1514 ntBASIC14.3□□□□□ -0.12
SLC1A3P43003 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC1A3P43003 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A3P43003 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A3P43003 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A3P43003 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC1A3P43003 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SLC1A3P43003 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A3P43003 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A3P43003 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A3P43003 AL161772.1-201ENST00000610494 4412 ntBASIC14.29□□□□□ -0.12
SLC1A3P43003 PCDHA3-202ENST00000532566 4594 ntBASIC14.29□□□□□ -0.12
SLC1A3P43003 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A3P43003 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.29□□□□□ -0.12
SLC1A3P43003 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SLC1A3P43003 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A3P43003 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC1A3P43003 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A3P43003 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A3P43003 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A3P43003 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.29□□□□□ -0.12
SLC1A3P43003 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A3P43003 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.29□□□□□ -0.12
SLC1A3P43003 MIR943-201ENST00000401286 94 ntBASIC14.29□□□□□ -0.12
SLC1A3P43003 AC074338.1-201ENST00000416825 156 ntBASIC14.29□□□□□ -0.12
SLC1A3P43003 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC1A3P43003 AC092580.3-201ENST00000430932 139 ntBASIC14.29□□□□□ -0.12
SLC1A3P43003 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.29□□□□□ -0.12
SLC1A3P43003 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.29□□□□□ -0.12
SLC1A3P43003 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.29□□□□□ -0.12
SLC1A3P43003 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.29□□□□□ -0.12
SLC1A3P43003 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC1A3P43003 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A3P43003 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.29□□□□□ -0.12
SLC1A3P43003 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SLC1A3P43003 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SLC1A3P43003 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SLC1A3P43003 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A3P43003 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A3P43003 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.29□□□□□ -0.12
SLC1A3P43003 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A3P43003 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A3P43003 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
SLC1A3P43003 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.29□□□□□ -0.12
SLC1A3P43003 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.29□□□□□ -0.12
SLC1A3P43003 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.29□□□□□ -0.12
SLC1A3P43003 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC1A3P43003 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A3P43003 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.29□□□□□ -0.12
SLC1A3P43003 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A3P43003 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC1A3P43003 AL390755.1-201ENST00000623716 2027 ntBASIC14.29□□□□□ -0.12
SLC1A3P43003 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SLC1A3P43003 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SLC1A3P43003 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC1A3P43003 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SLC1A3P43003 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A3P43003 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A3P43003 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A3P43003 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A3P43003 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A3P43003 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SLC1A3P43003 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SLC1A3P43003 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A3P43003 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A3P43003 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A3P43003 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A3P43003 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC1A3P43003 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.28□□□□□ -0.12
SLC1A3P43003 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.28□□□□□ -0.12
SLC1A3P43003 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC1A3P43003 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A3P43003 TREML5P-201ENST00000421694 576 ntBASIC14.28□□□□□ -0.12
SLC1A3P43003 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A3P43003 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC1A3P43003 ZNF890P-202ENST00000530367 1156 ntBASIC14.28□□□□□ -0.12
SLC1A3P43003 AC232323.1-201ENST00000540724 2099 ntBASIC14.28□□□□□ -0.12
SLC1A3P43003 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A3P43003 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SLC1A3P43003 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.28□□□□□ -0.12
SLC1A3P43003 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.28□□□□□ -0.12
SLC1A3P43003 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.28□□□□□ -0.12
SLC1A3P43003 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.28□□□□□ -0.12
SLC1A3P43003 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.28□□□□□ -0.12
SLC1A3P43003 AC074044.1-201ENST00000609673 707 ntBASIC14.28□□□□□ -0.12
SLC1A3P43003 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A3P43003 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SLC1A3P43003 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
SLC1A3P43003 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SLC1A3P43003 REXO1L5P-201ENST00000622260 2098 ntBASIC14.28□□□□□ -0.12
SLC1A3P43003 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.28□□□□□ -0.12
SLC1A3P43003 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A3P43003 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SLC1A3P43003 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A3P43003 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.28□□□□□ -0.12
SLC1A3P43003 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SLC1A3P43003 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A3P43003 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A3P43003 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms