Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ATP6V1AP38606 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V1AP38606 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V1AP38606 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V1AP38606 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V1AP38606 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC19.5■□□□□ 0.71
ATP6V1AP38606 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V1AP38606 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ATP6V1AP38606 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V1AP38606 SLC16A6P1-201ENST00000413214 1059 ntBASIC19.5■□□□□ 0.71
ATP6V1AP38606 CMC1-204ENST00000423894 549 ntTSL 2 BASIC19.5■□□□□ 0.71
ATP6V1AP38606 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V1AP38606 GHSR-202ENST00000427970 912 ntBASIC19.5■□□□□ 0.71
ATP6V1AP38606 AL596276.2-201ENST00000447525 331 ntBASIC19.5■□□□□ 0.71
ATP6V1AP38606 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC19.5■□□□□ 0.71
ATP6V1AP38606 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC19.5■□□□□ 0.71
ATP6V1AP38606 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC19.5■□□□□ 0.71
ATP6V1AP38606 AL161670.2-201ENST00000557650 1227 ntBASIC19.5■□□□□ 0.71
ATP6V1AP38606 CSH2-206ENST00000560142 749 ntTSL 5 BASIC19.5■□□□□ 0.71
ATP6V1AP38606 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V1AP38606 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC19.5■□□□□ 0.71
ATP6V1AP38606 AL805961.1-203ENST00000641078 1258 ntBASIC19.5■□□□□ 0.71
ATP6V1AP38606 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V1AP38606 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V1AP38606 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V1AP38606 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.5■□□□□ 0.71
ATP6V1AP38606 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V1AP38606 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V1AP38606 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ATP6V1AP38606 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP6V1AP38606 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP6V1AP38606 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
ATP6V1AP38606 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP6V1AP38606 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP6V1AP38606 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP6V1AP38606 AC127383.1-201ENST00000444697 1800 ntBASIC19.49■□□□□ 0.71
ATP6V1AP38606 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC19.49■□□□□ 0.71
ATP6V1AP38606 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
ATP6V1AP38606 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP6V1AP38606 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP6V1AP38606 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
ATP6V1AP38606 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
ATP6V1AP38606 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC19.49■□□□□ 0.71
ATP6V1AP38606 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC19.49■□□□□ 0.71
ATP6V1AP38606 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC19.49■□□□□ 0.71
ATP6V1AP38606 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
ATP6V1AP38606 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC19.49■□□□□ 0.71
ATP6V1AP38606 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC19.49■□□□□ 0.71
ATP6V1AP38606 MIR4683-201ENST00000579659 81 ntBASIC19.49■□□□□ 0.71
ATP6V1AP38606 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP6V1AP38606 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC19.49■□□□□ 0.71
ATP6V1AP38606 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC19.49■□□□□ 0.71
ATP6V1AP38606 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP6V1AP38606 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ATP6V1AP38606 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ATP6V1AP38606 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
ATP6V1AP38606 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP6V1AP38606 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
ATP6V1AP38606 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP6V1AP38606 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP6V1AP38606 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP6V1AP38606 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP6V1AP38606 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ATP6V1AP38606 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ATP6V1AP38606 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
ATP6V1AP38606 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.48■□□□□ 0.71
ATP6V1AP38606 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP6V1AP38606 UFM1-202ENST00000379649 846 ntTSL 4 BASIC19.48■□□□□ 0.71
ATP6V1AP38606 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ATP6V1AP38606 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP6V1AP38606 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP6V1AP38606 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC19.48■□□□□ 0.71
ATP6V1AP38606 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP6V1AP38606 TUBB8P8-201ENST00000458717 1058 ntBASIC19.48■□□□□ 0.71
ATP6V1AP38606 MBP-227ENST00000526111 581 ntTSL 4 BASIC19.48■□□□□ 0.71
ATP6V1AP38606 SYT17-208ENST00000568433 812 ntTSL 3 BASIC19.48■□□□□ 0.71
ATP6V1AP38606 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC19.48■□□□□ 0.71
ATP6V1AP38606 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP6V1AP38606 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP6V1AP38606 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP6V1AP38606 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP6V1AP38606 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP6V1AP38606 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ATP6V1AP38606 FKBP4P6-201ENST00000457486 1332 ntBASIC19.48■□□□□ 0.71
ATP6V1AP38606 AC006480.2-201ENST00000609770 1337 ntBASIC19.48■□□□□ 0.71
ATP6V1AP38606 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ATP6V1AP38606 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP6V1AP38606 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP6V1AP38606 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP6V1AP38606 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATP6V1AP38606 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC19.47■□□□□ 0.71
ATP6V1AP38606 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.47■□□□□ 0.71
ATP6V1AP38606 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP6V1AP38606 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP6V1AP38606 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
ATP6V1AP38606 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATP6V1AP38606 REXO1L5P-201ENST00000622260 2098 ntBASIC19.47■□□□□ 0.71
ATP6V1AP38606 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP6V1AP38606 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.47■□□□□ 0.71
ATP6V1AP38606 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms