Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXA10P31260 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXA10P31260 KLF2P1-201ENST00000447438 1042 ntBASIC18.57■□□□□ 0.56
HOXA10P31260 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC18.57■□□□□ 0.56
HOXA10P31260 AC116345.2-201ENST00000512837 523 ntBASIC18.57■□□□□ 0.56
HOXA10P31260 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HOXA10P31260 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC18.57■□□□□ 0.56
HOXA10P31260 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC18.57■□□□□ 0.56
HOXA10P31260 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HOXA10P31260 CDK7-214ENST00000626796 358 ntTSL 5 BASIC18.57■□□□□ 0.56
HOXA10P31260 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC18.57■□□□□ 0.56
HOXA10P31260 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXA10P31260 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXA10P31260 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXA10P31260 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.57■□□□□ 0.56
HOXA10P31260 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXA10P31260 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
HOXA10P31260 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
HOXA10P31260 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXA10P31260 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HOXA10P31260 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXA10P31260 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HOXA10P31260 AC020910.5-201ENST00000623668 1865 ntBASIC18.56■□□□□ 0.56
HOXA10P31260 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXA10P31260 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXA10P31260 MVK-214ENST00000629016 1591 ntTSL 5 BASIC18.56■□□□□ 0.56
HOXA10P31260 PCDH8P1-201ENST00000428983 2773 ntBASIC18.56■□□□□ 0.56
HOXA10P31260 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXA10P31260 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HOXA10P31260 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HOXA10P31260 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXA10P31260 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
HOXA10P31260 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXA10P31260 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HOXA10P31260 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HOXA10P31260 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXA10P31260 HNRNPA1P41-201ENST00000397777 928 ntBASIC18.56■□□□□ 0.56
HOXA10P31260 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.56■□□□□ 0.56
HOXA10P31260 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HOXA10P31260 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC18.56■□□□□ 0.56
HOXA10P31260 LY6E-208ENST00000520531 490 ntTSL 2 BASIC18.56■□□□□ 0.56
HOXA10P31260 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC18.56■□□□□ 0.56
HOXA10P31260 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC18.56■□□□□ 0.56
HOXA10P31260 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
HOXA10P31260 MIR3147-201ENST00000577811 66 ntBASIC18.56■□□□□ 0.56
HOXA10P31260 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC18.56■□□□□ 0.56
HOXA10P31260 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HOXA10P31260 MIR4754-201ENST00000582477 89 ntBASIC18.56■□□□□ 0.56
HOXA10P31260 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.56■□□□□ 0.56
HOXA10P31260 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC18.56■□□□□ 0.56
HOXA10P31260 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HOXA10P31260 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC18.56■□□□□ 0.56
HOXA10P31260 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
HOXA10P31260 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXA10P31260 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.56■□□□□ 0.56
HOXA10P31260 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC18.56■□□□□ 0.56
HOXA10P31260 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HOXA10P31260 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
HOXA10P31260 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXA10P31260 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HOXA10P31260 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXA10P31260 FAM90A7P-201ENST00000382628 1395 ntBASIC18.55■□□□□ 0.56
HOXA10P31260 FAM90A23P-201ENST00000400136 1395 ntBASIC18.55■□□□□ 0.56
HOXA10P31260 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXA10P31260 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.55■□□□□ 0.56
HOXA10P31260 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXA10P31260 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXA10P31260 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.55■□□□□ 0.56
HOXA10P31260 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXA10P31260 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC18.55■□□□□ 0.56
HOXA10P31260 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HOXA10P31260 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXA10P31260 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.55■□□□□ 0.56
HOXA10P31260 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXA10P31260 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXA10P31260 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.55■□□□□ 0.56
HOXA10P31260 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC18.55■□□□□ 0.56
HOXA10P31260 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXA10P31260 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HOXA10P31260 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXA10P31260 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HOXA10P31260 AC026316.1-201ENST00000398900 414 ntBASIC18.55■□□□□ 0.56
HOXA10P31260 AC012441.2-201ENST00000444843 739 ntBASIC18.55■□□□□ 0.56
HOXA10P31260 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC18.55■□□□□ 0.56
HOXA10P31260 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXA10P31260 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.55■□□□□ 0.56
HOXA10P31260 RN7SL555P-201ENST00000584742 339 ntBASIC18.55■□□□□ 0.56
HOXA10P31260 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.55■□□□□ 0.56
HOXA10P31260 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HOXA10P31260 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXA10P31260 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC18.55■□□□□ 0.56
HOXA10P31260 AC010491.1-201ENST00000563101 2797 ntBASIC18.55■□□□□ 0.56
HOXA10P31260 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HOXA10P31260 AMT-239ENST00000636865 1914 ntTSL 5 BASIC18.55■□□□□ 0.56
HOXA10P31260 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXA10P31260 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HOXA10P31260 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HOXA10P31260 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
HOXA10P31260 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
HOXA10P31260 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms