Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
TM4SF1P30408 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC18.87■□□□□ 0.61
TM4SF1P30408 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TM4SF1P30408 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM4SF1P30408 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC18.87■□□□□ 0.61
TM4SF1P30408 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TM4SF1P30408 AC132192.2-201ENST00000596206 1147 ntBASIC18.87■□□□□ 0.61
TM4SF1P30408 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TM4SF1P30408 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC18.87■□□□□ 0.61
TM4SF1P30408 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
TM4SF1P30408 AC051619.9-201ENST00000623237 597 ntBASIC18.87■□□□□ 0.61
TM4SF1P30408 AC020910.5-201ENST00000623668 1865 ntBASIC18.87■□□□□ 0.61
TM4SF1P30408 AC009090.5-201ENST00000624886 2285 ntBASIC18.87■□□□□ 0.61
TM4SF1P30408 AMT-239ENST00000636865 1914 ntTSL 5 BASIC18.87■□□□□ 0.61
TM4SF1P30408 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TM4SF1P30408 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF1P30408 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF1P30408 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.86■□□□□ 0.61
TM4SF1P30408 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.86■□□□□ 0.61
TM4SF1P30408 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF1P30408 MBLAC2-202ENST00000514906 1936 ntBASIC18.86■□□□□ 0.61
TM4SF1P30408 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.86■□□□□ 0.61
TM4SF1P30408 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF1P30408 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TM4SF1P30408 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF1P30408 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF1P30408 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.86■□□□□ 0.61
TM4SF1P30408 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.86■□□□□ 0.61
TM4SF1P30408 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF1P30408 RN7SKP230-201ENST00000365642 335 ntBASIC18.86■□□□□ 0.61
TM4SF1P30408 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF1P30408 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF1P30408 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF1P30408 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF1P30408 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF1P30408 AL627389.1-201ENST00000413508 1182 ntBASIC18.86■□□□□ 0.61
TM4SF1P30408 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF1P30408 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC18.86■□□□□ 0.61
TM4SF1P30408 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC18.86■□□□□ 0.61
TM4SF1P30408 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC18.86■□□□□ 0.61
TM4SF1P30408 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC18.86■□□□□ 0.61
TM4SF1P30408 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC18.86■□□□□ 0.61
TM4SF1P30408 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC18.86■□□□□ 0.61
TM4SF1P30408 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC18.86■□□□□ 0.61
TM4SF1P30408 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF1P30408 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC18.86■□□□□ 0.61
TM4SF1P30408 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF1P30408 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF1P30408 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF1P30408 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TM4SF1P30408 HTR7P1-202ENST00000624664 4411 ntBASIC18.86■□□□□ 0.61
TM4SF1P30408 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.86■□□□□ 0.61
TM4SF1P30408 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF1P30408 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF1P30408 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF1P30408 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.86■□□□□ 0.61
TM4SF1P30408 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TM4SF1P30408 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TM4SF1P30408 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM4SF1P30408 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.85■□□□□ 0.61
TM4SF1P30408 AC011840.2-201ENST00000563063 1520 ntBASIC18.85■□□□□ 0.61
TM4SF1P30408 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
TM4SF1P30408 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM4SF1P30408 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.85■□□□□ 0.61
TM4SF1P30408 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
TM4SF1P30408 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.85■□□□□ 0.61
TM4SF1P30408 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC18.85■□□□□ 0.61
TM4SF1P30408 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM4SF1P30408 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM4SF1P30408 AC012441.2-201ENST00000444843 739 ntBASIC18.85■□□□□ 0.61
TM4SF1P30408 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC18.85■□□□□ 0.61
TM4SF1P30408 SCARNA21-201ENST00000517026 139 ntBASIC18.85■□□□□ 0.61
TM4SF1P30408 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC18.85■□□□□ 0.61
TM4SF1P30408 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC18.85■□□□□ 0.61
TM4SF1P30408 AC026803.1-201ENST00000569130 274 ntBASIC18.85■□□□□ 0.61
TM4SF1P30408 AC138894.2-201ENST00000602838 371 ntBASIC18.85■□□□□ 0.61
TM4SF1P30408 AC008825.2-201ENST00000603374 718 ntBASIC18.85■□□□□ 0.61
TM4SF1P30408 AC103810.10-201ENST00000606504 343 ntBASIC18.85■□□□□ 0.61
TM4SF1P30408 WT1-AS_6.1-201ENST00000614919 121 ntBASIC18.85■□□□□ 0.61
TM4SF1P30408 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
TM4SF1P30408 Z98259.2-201ENST00000641583 609 ntBASIC18.85■□□□□ 0.61
TM4SF1P30408 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM4SF1P30408 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.85■□□□□ 0.61
TM4SF1P30408 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.85■□□□□ 0.61
TM4SF1P30408 AC092127.1-201ENST00000567093 3455 ntBASIC18.85■□□□□ 0.61
TM4SF1P30408 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM4SF1P30408 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM4SF1P30408 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.85■□□□□ 0.61
TM4SF1P30408 AC010491.1-201ENST00000563101 2797 ntBASIC18.85■□□□□ 0.61
TM4SF1P30408 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TM4SF1P30408 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TM4SF1P30408 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TM4SF1P30408 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TM4SF1P30408 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.84■□□□□ 0.61
TM4SF1P30408 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.84■□□□□ 0.61
TM4SF1P30408 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
TM4SF1P30408 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TM4SF1P30408 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.84■□□□□ 0.61
TM4SF1P30408 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.84■□□□□ 0.61
TM4SF1P30408 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms