Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
GDF1P27539 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDF1P27539 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GDF1P27539 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
GDF1P27539 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.04□□□□□ -0.16
GDF1P27539 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDF1P27539 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDF1P27539 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.04□□□□□ -0.16
GDF1P27539 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDF1P27539 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.04□□□□□ -0.16
GDF1P27539 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.04□□□□□ -0.16
GDF1P27539 USP32P1-208ENST00000506594 1164 ntBASIC14.04□□□□□ -0.16
GDF1P27539 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GDF1P27539 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.04□□□□□ -0.16
GDF1P27539 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.04□□□□□ -0.16
GDF1P27539 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
GDF1P27539 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.04□□□□□ -0.16
GDF1P27539 CLUHP6-201ENST00000580789 941 ntBASIC14.04□□□□□ -0.16
GDF1P27539 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.04□□□□□ -0.16
GDF1P27539 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.04□□□□□ -0.16
GDF1P27539 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.04□□□□□ -0.16
GDF1P27539 AL008721.1-201ENST00000609964 604 ntBASIC14.04□□□□□ -0.16
GDF1P27539 AL022328.1-201ENST00000610050 478 ntBASIC14.04□□□□□ -0.16
GDF1P27539 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.04□□□□□ -0.16
GDF1P27539 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDF1P27539 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GDF1P27539 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDF1P27539 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDF1P27539 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.04□□□□□ -0.16
GDF1P27539 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDF1P27539 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDF1P27539 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GDF1P27539 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDF1P27539 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
GDF1P27539 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDF1P27539 AL138799.1-201ENST00000448213 1675 ntBASIC14.04□□□□□ -0.16
GDF1P27539 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDF1P27539 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.04□□□□□ -0.16
GDF1P27539 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.04□□□□□ -0.16
GDF1P27539 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDF1P27539 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.03□□□□□ -0.16
GDF1P27539 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.03□□□□□ -0.16
GDF1P27539 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDF1P27539 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.03□□□□□ -0.16
GDF1P27539 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GDF1P27539 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDF1P27539 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.03□□□□□ -0.16
GDF1P27539 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDF1P27539 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDF1P27539 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDF1P27539 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
GDF1P27539 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDF1P27539 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.03□□□□□ -0.16
GDF1P27539 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.03□□□□□ -0.16
GDF1P27539 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDF1P27539 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.03□□□□□ -0.16
GDF1P27539 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.03□□□□□ -0.16
GDF1P27539 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.03□□□□□ -0.16
GDF1P27539 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
GDF1P27539 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
GDF1P27539 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.03□□□□□ -0.16
GDF1P27539 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.03□□□□□ -0.16
GDF1P27539 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GDF1P27539 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.03□□□□□ -0.16
GDF1P27539 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.03□□□□□ -0.16
GDF1P27539 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.03□□□□□ -0.16
GDF1P27539 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.03□□□□□ -0.16
GDF1P27539 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
GDF1P27539 AL359881.2-201ENST00000602973 570 ntBASIC14.03□□□□□ -0.16
GDF1P27539 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.03□□□□□ -0.16
GDF1P27539 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.03□□□□□ -0.16
GDF1P27539 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.03□□□□□ -0.16
GDF1P27539 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.03□□□□□ -0.16
GDF1P27539 AC134312.5-201ENST00000568031 1313 ntBASIC14.03□□□□□ -0.16
GDF1P27539 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
GDF1P27539 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDF1P27539 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.03□□□□□ -0.16
GDF1P27539 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDF1P27539 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GDF1P27539 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.03□□□□□ -0.16
GDF1P27539 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDF1P27539 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.03□□□□□ -0.16
GDF1P27539 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDF1P27539 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDF1P27539 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GDF1P27539 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GDF1P27539 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
GDF1P27539 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDF1P27539 AC092850.2-201ENST00000623821 2697 ntBASIC14.03□□□□□ -0.16
GDF1P27539 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
GDF1P27539 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDF1P27539 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDF1P27539 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDF1P27539 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.03□□□□□ -0.16
GDF1P27539 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.03□□□□□ -0.16
GDF1P27539 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GDF1P27539 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GDF1P27539 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
GDF1P27539 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.02□□□□□ -0.16
GDF1P27539 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms