Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC127383.1-201ENST00000444697 1800 ntBASIC14.55□□□□□ -0.08
CHMP24386 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.55□□□□□ -0.08
CHMP24386 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP24386 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP24386 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.54□□□□□ -0.08
CHMP24386 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CHMP24386 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP24386 AL359258.3-201ENST00000622910 2331 ntBASIC14.54□□□□□ -0.08
CHMP24386 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CHMP24386 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CHMP24386 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP24386 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.54□□□□□ -0.08
CHMP24386 AC004987.2-201ENST00000395959 1148 ntBASIC14.54□□□□□ -0.08
CHMP24386 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.54□□□□□ -0.08
CHMP24386 AL080243.2-201ENST00000418783 582 ntBASIC14.54□□□□□ -0.08
CHMP24386 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CHMP24386 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.54□□□□□ -0.08
CHMP24386 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CHMP24386 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.54□□□□□ -0.08
CHMP24386 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.54□□□□□ -0.08
CHMP24386 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP24386 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP24386 AC243562.2-201ENST00000561247 970 ntBASIC14.54□□□□□ -0.08
CHMP24386 MIR4745-201ENST00000577608 62 ntBASIC14.54□□□□□ -0.08
CHMP24386 MIR4313-201ENST00000580760 101 ntBASIC14.54□□□□□ -0.08
CHMP24386 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CHMP24386 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.54□□□□□ -0.08
CHMP24386 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP24386 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP24386 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP24386 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CHMP24386 LINC00528-201ENST00000600723 2160 ntBASIC14.54□□□□□ -0.08
CHMP24386 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP24386 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP24386 LINC00552-201ENST00000625151 2579 ntBASIC14.54□□□□□ -0.08
CHMP24386 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP24386 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CHMP24386 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP24386 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP24386 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP24386 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CHMP24386 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP24386 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CHMP24386 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP24386 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP24386 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.53□□□□□ -0.08
CHMP24386 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP24386 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP24386 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP24386 MIR600HG-201ENST00000449175 5984 ntBASIC14.53□□□□□ -0.08
CHMP24386 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP24386 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP24386 GRK6P1-201ENST00000400595 1711 ntBASIC14.53□□□□□ -0.08
CHMP24386 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
CHMP24386 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP24386 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.53□□□□□ -0.08
CHMP24386 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CHMP24386 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.53□□□□□ -0.08
CHMP24386 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP24386 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.53□□□□□ -0.08
CHMP24386 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP24386 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CHMP24386 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP24386 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.53□□□□□ -0.08
CHMP24386 TSSK5P-201ENST00000423978 907 ntBASIC14.53□□□□□ -0.08
CHMP24386 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.53□□□□□ -0.08
CHMP24386 FAM207CP-201ENST00000443486 507 ntBASIC14.53□□□□□ -0.08
CHMP24386 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.53□□□□□ -0.08
CHMP24386 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.53□□□□□ -0.08
CHMP24386 AC004890.2-204ENST00000481968 304 ntBASIC14.53□□□□□ -0.08
CHMP24386 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.53□□□□□ -0.08
CHMP24386 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.53□□□□□ -0.08
CHMP24386 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.53□□□□□ -0.08
CHMP24386 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.53□□□□□ -0.08
CHMP24386 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP24386 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.53□□□□□ -0.08
CHMP24386 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CHMP24386 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP24386 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP24386 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CHMP24386 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CHMP24386 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP24386 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
CHMP24386 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP24386 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CHMP24386 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP24386 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP24386 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.53□□□□□ -0.08
CHMP24386 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP24386 AC232323.1-201ENST00000540724 2099 ntBASIC14.53□□□□□ -0.08
CHMP24386 REXO1L5P-201ENST00000622260 2098 ntBASIC14.53□□□□□ -0.08
CHMP24386 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHMP24386 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.53□□□□□ -0.08
CHMP24386 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CHMP24386 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CHMP24386 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CHMP24386 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.52□□□□□ -0.08
CHMP24386 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
CHMP24386 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CHMP24386 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms