Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CCL3L1P16619 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL3L1P16619 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL3L1P16619 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3L1P16619 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CCL3L1P16619 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CCL3L1P16619 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL3L1P16619 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3L1P16619 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3L1P16619 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3L1P16619 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
CCL3L1P16619 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL3L1P16619 MST1L-201ENST00000442552 2185 ntBASIC12.79□□□□□ -0.36
CCL3L1P16619 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3L1P16619 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL3L1P16619 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL3L1P16619 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CCL3L1P16619 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CCL3L1P16619 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3L1P16619 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3L1P16619 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3L1P16619 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3L1P16619 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CCL3L1P16619 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3L1P16619 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
CCL3L1P16619 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL3L1P16619 AL353779.1-201ENST00000434793 351 ntBASIC12.79□□□□□ -0.36
CCL3L1P16619 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.79□□□□□ -0.36
CCL3L1P16619 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.79□□□□□ -0.36
CCL3L1P16619 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL3L1P16619 AC104596.2-201ENST00000512793 793 ntBASIC12.79□□□□□ -0.36
CCL3L1P16619 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.79□□□□□ -0.36
CCL3L1P16619 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.79□□□□□ -0.36
CCL3L1P16619 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
CCL3L1P16619 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
CCL3L1P16619 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3L1P16619 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL3L1P16619 AC093726.1-201ENST00000608064 963 ntBASIC12.79□□□□□ -0.36
CCL3L1P16619 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
CCL3L1P16619 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL3L1P16619 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3L1P16619 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3L1P16619 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CCL3L1P16619 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.79□□□□□ -0.36
CCL3L1P16619 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3L1P16619 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.79□□□□□ -0.36
CCL3L1P16619 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CCL3L1P16619 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CCL3L1P16619 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL3L1P16619 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL3L1P16619 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3L1P16619 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3L1P16619 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3L1P16619 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3L1P16619 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
CCL3L1P16619 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL3L1P16619 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CCL3L1P16619 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3L1P16619 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3L1P16619 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
CCL3L1P16619 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
CCL3L1P16619 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3L1P16619 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3L1P16619 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3L1P16619 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3L1P16619 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3L1P16619 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3L1P16619 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3L1P16619 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CCL3L1P16619 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
CCL3L1P16619 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3L1P16619 RPL5P21-201ENST00000404620 815 ntBASIC12.78□□□□□ -0.36
CCL3L1P16619 AC087499.6-201ENST00000411576 835 ntBASIC12.78□□□□□ -0.36
CCL3L1P16619 AC098850.1-201ENST00000419919 790 ntBASIC12.78□□□□□ -0.36
CCL3L1P16619 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3L1P16619 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3L1P16619 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.78□□□□□ -0.36
CCL3L1P16619 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL3L1P16619 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3L1P16619 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.78□□□□□ -0.36
CCL3L1P16619 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.78□□□□□ -0.36
CCL3L1P16619 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.78□□□□□ -0.36
CCL3L1P16619 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.78□□□□□ -0.36
CCL3L1P16619 AL109954.1-202ENST00000564051 2148 ntBASIC12.78□□□□□ -0.36
CCL3L1P16619 WASH4P-201ENST00000564273 1246 ntBASIC12.78□□□□□ -0.36
CCL3L1P16619 RRP7BP-205ENST00000566851 833 ntBASIC12.78□□□□□ -0.36
CCL3L1P16619 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CCL3L1P16619 AL049840.4-201ENST00000602422 811 ntBASIC12.78□□□□□ -0.36
CCL3L1P16619 AC008494.3-201ENST00000606615 944 ntBASIC12.78□□□□□ -0.36
CCL3L1P16619 AC099568.2-201ENST00000609194 695 ntBASIC12.78□□□□□ -0.36
CCL3L1P16619 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3L1P16619 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL3L1P16619 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.78□□□□□ -0.36
CCL3L1P16619 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3L1P16619 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CCL3L1P16619 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CCL3L1P16619 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3L1P16619 AC148477.4-201ENST00000613430 1793 ntBASIC12.78□□□□□ -0.36
CCL3L1P16619 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL3L1P16619 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms