Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC130P13994 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC130P13994 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
CCDC130P13994 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC130P13994 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC130P13994 TMBIM7P-203ENST00000641617 1718 ntBASIC16.39■□□□□ 0.21
CCDC130P13994 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
CCDC130P13994 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CCDC130P13994 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CCDC130P13994 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC130P13994 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC130P13994 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CCDC130P13994 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC130P13994 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC130P13994 AC073347.1-201ENST00000421633 2643 ntBASIC16.38■□□□□ 0.21
CCDC130P13994 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC130P13994 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC130P13994 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC130P13994 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CCDC130P13994 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
CCDC130P13994 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC130P13994 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC130P13994 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC130P13994 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.38■□□□□ 0.21
CCDC130P13994 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.38■□□□□ 0.21
CCDC130P13994 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC130P13994 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.38■□□□□ 0.21
CCDC130P13994 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CCDC130P13994 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.38■□□□□ 0.21
CCDC130P13994 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC130P13994 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.38■□□□□ 0.21
CCDC130P13994 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CCDC130P13994 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.38■□□□□ 0.21
CCDC130P13994 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.38■□□□□ 0.21
CCDC130P13994 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.38■□□□□ 0.21
CCDC130P13994 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CCDC130P13994 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC130P13994 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.38■□□□□ 0.21
CCDC130P13994 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC130P13994 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC130P13994 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC130P13994 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC130P13994 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC130P13994 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC130P13994 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC130P13994 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC130P13994 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC130P13994 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC130P13994 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CCDC130P13994 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC130P13994 AL138799.1-201ENST00000448213 1675 ntBASIC16.37■□□□□ 0.21
CCDC130P13994 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC130P13994 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC130P13994 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC130P13994 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC130P13994 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC130P13994 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC130P13994 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC130P13994 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC130P13994 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC130P13994 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CCDC130P13994 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC130P13994 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC130P13994 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC130P13994 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC130P13994 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CCDC130P13994 RPL5P21-201ENST00000404620 815 ntBASIC16.37■□□□□ 0.21
CCDC130P13994 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC130P13994 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC130P13994 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.37■□□□□ 0.21
CCDC130P13994 TTTY23B-201ENST00000442790 549 ntBASIC16.37■□□□□ 0.21
CCDC130P13994 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC130P13994 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC130P13994 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.37■□□□□ 0.21
CCDC130P13994 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC130P13994 AP001582.1-201ENST00000525856 295 ntBASIC16.37■□□□□ 0.21
CCDC130P13994 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.37■□□□□ 0.21
CCDC130P13994 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC130P13994 CR383656.12-201ENST00000549567 513 ntBASIC16.37■□□□□ 0.21
CCDC130P13994 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC130P13994 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC130P13994 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.37■□□□□ 0.21
CCDC130P13994 CLUHP6-201ENST00000580789 941 ntBASIC16.37■□□□□ 0.21
CCDC130P13994 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC130P13994 AC093813.1-201ENST00000605066 256 ntBASIC16.37■□□□□ 0.21
CCDC130P13994 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC130P13994 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC130P13994 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC130P13994 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC130P13994 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC130P13994 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC130P13994 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
CCDC130P13994 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC130P13994 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC130P13994 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC130P13994 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC130P13994 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC130P13994 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC130P13994 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC130P13994 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms