Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOP1P11387 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.19■□□□□ 0.5
TOP1P11387 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.18■□□□□ 0.5
TOP1P11387 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TOP1P11387 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TOP1P11387 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.18■□□□□ 0.5
TOP1P11387 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.18■□□□□ 0.5
TOP1P11387 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.18■□□□□ 0.5
TOP1P11387 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TOP1P11387 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TOP1P11387 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TOP1P11387 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.18■□□□□ 0.5
TOP1P11387 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.18■□□□□ 0.5
TOP1P11387 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TOP1P11387 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.18■□□□□ 0.5
TOP1P11387 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TOP1P11387 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.18■□□□□ 0.5
TOP1P11387 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TOP1P11387 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TOP1P11387 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TOP1P11387 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TOP1P11387 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TOP1P11387 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.18■□□□□ 0.5
TOP1P11387 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TOP1P11387 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.18■□□□□ 0.5
TOP1P11387 U91328.1-201ENST00000437528 223 ntBASIC18.18■□□□□ 0.5
TOP1P11387 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.18■□□□□ 0.5
TOP1P11387 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TOP1P11387 AC093813.1-201ENST00000605066 256 ntBASIC18.18■□□□□ 0.5
TOP1P11387 AC025181.2-201ENST00000606994 802 ntBASIC18.18■□□□□ 0.5
TOP1P11387 AC107373.2-201ENST00000607735 490 ntBASIC18.18■□□□□ 0.5
TOP1P11387 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TOP1P11387 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TOP1P11387 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TOP1P11387 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TOP1P11387 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TOP1P11387 AC013268.4-201ENST00000637413 2228 ntBASIC18.18■□□□□ 0.5
TOP1P11387 AP002414.2-201ENST00000591780 3365 ntBASIC18.17■□□□□ 0.5
TOP1P11387 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TOP1P11387 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.17■□□□□ 0.5
TOP1P11387 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TOP1P11387 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.17■□□□□ 0.5
TOP1P11387 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.17■□□□□ 0.5
TOP1P11387 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
TOP1P11387 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.17■□□□□ 0.5
TOP1P11387 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.17■□□□□ 0.5
TOP1P11387 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TOP1P11387 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TOP1P11387 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TOP1P11387 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TOP1P11387 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.17■□□□□ 0.5
TOP1P11387 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TOP1P11387 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TOP1P11387 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.17■□□□□ 0.5
TOP1P11387 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TOP1P11387 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.17■□□□□ 0.5
TOP1P11387 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TOP1P11387 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.17■□□□□ 0.5
TOP1P11387 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TOP1P11387 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.17■□□□□ 0.5
TOP1P11387 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.17■□□□□ 0.5
TOP1P11387 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TOP1P11387 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TOP1P11387 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TOP1P11387 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TOP1P11387 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TOP1P11387 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.17■□□□□ 0.5
TOP1P11387 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TOP1P11387 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TOP1P11387 AC084364.1-201ENST00000551967 1556 ntBASIC18.17■□□□□ 0.5
TOP1P11387 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TOP1P11387 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TOP1P11387 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TOP1P11387 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TOP1P11387 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TOP1P11387 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TOP1P11387 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TOP1P11387 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TOP1P11387 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TOP1P11387 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TOP1P11387 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.16■□□□□ 0.5
TOP1P11387 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TOP1P11387 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TOP1P11387 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.16■□□□□ 0.5
TOP1P11387 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TOP1P11387 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TOP1P11387 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.16■□□□□ 0.5
TOP1P11387 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.16■□□□□ 0.5
TOP1P11387 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TOP1P11387 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
TOP1P11387 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.16■□□□□ 0.5
TOP1P11387 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.16■□□□□ 0.5
TOP1P11387 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TOP1P11387 TMEM14DP-201ENST00000422205 345 ntBASIC18.16■□□□□ 0.5
TOP1P11387 ACTG1P3-201ENST00000431775 1114 ntBASIC18.16■□□□□ 0.5
TOP1P11387 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.16■□□□□ 0.5
TOP1P11387 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TOP1P11387 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.16■□□□□ 0.5
TOP1P11387 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TOP1P11387 AC015936.2-201ENST00000593177 259 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms