Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LAMP1P11279 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.7□□□□□ -0.06
LAMP1P11279 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LAMP1P11279 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LAMP1P11279 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.7□□□□□ -0.06
LAMP1P11279 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LAMP1P11279 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LAMP1P11279 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LAMP1P11279 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.7□□□□□ -0.06
LAMP1P11279 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.7□□□□□ -0.06
LAMP1P11279 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LAMP1P11279 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LAMP1P11279 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.7□□□□□ -0.06
LAMP1P11279 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
LAMP1P11279 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LAMP1P11279 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LAMP1P11279 TSEN15P1-201ENST00000423257 515 ntBASIC14.7□□□□□ -0.06
LAMP1P11279 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.7□□□□□ -0.06
LAMP1P11279 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.7□□□□□ -0.06
LAMP1P11279 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.7□□□□□ -0.06
LAMP1P11279 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LAMP1P11279 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.7□□□□□ -0.06
LAMP1P11279 AC010336.2-201ENST00000564226 506 ntBASIC14.7□□□□□ -0.06
LAMP1P11279 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
LAMP1P11279 AC051619.7-201ENST00000568314 623 ntBASIC14.7□□□□□ -0.06
LAMP1P11279 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.7□□□□□ -0.06
LAMP1P11279 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LAMP1P11279 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.7□□□□□ -0.06
LAMP1P11279 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.7□□□□□ -0.06
LAMP1P11279 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LAMP1P11279 AC007292.2-201ENST00000593524 1812 ntBASIC14.7□□□□□ -0.06
LAMP1P11279 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LAMP1P11279 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.7□□□□□ -0.06
LAMP1P11279 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.7□□□□□ -0.06
LAMP1P11279 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.7□□□□□ -0.06
LAMP1P11279 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LAMP1P11279 REXO1L2P-201ENST00000425429 2069 ntBASIC14.7□□□□□ -0.06
LAMP1P11279 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LAMP1P11279 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LAMP1P11279 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LAMP1P11279 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LAMP1P11279 AL390755.1-201ENST00000623716 2027 ntBASIC14.7□□□□□ -0.06
LAMP1P11279 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LAMP1P11279 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LAMP1P11279 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LAMP1P11279 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.69□□□□□ -0.06
LAMP1P11279 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LAMP1P11279 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LAMP1P11279 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LAMP1P11279 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.69□□□□□ -0.06
LAMP1P11279 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LAMP1P11279 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LAMP1P11279 TUBB3P1-201ENST00000405796 1332 ntBASIC14.69□□□□□ -0.06
LAMP1P11279 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.69□□□□□ -0.06
LAMP1P11279 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.69□□□□□ -0.06
LAMP1P11279 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LAMP1P11279 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LAMP1P11279 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LAMP1P11279 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
LAMP1P11279 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LAMP1P11279 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LAMP1P11279 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LAMP1P11279 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LAMP1P11279 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.69□□□□□ -0.06
LAMP1P11279 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LAMP1P11279 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LAMP1P11279 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LAMP1P11279 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LAMP1P11279 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LAMP1P11279 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LAMP1P11279 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LAMP1P11279 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.69□□□□□ -0.06
LAMP1P11279 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.69□□□□□ -0.06
LAMP1P11279 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.69□□□□□ -0.06
LAMP1P11279 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.69□□□□□ -0.06
LAMP1P11279 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.69□□□□□ -0.06
LAMP1P11279 RN7SL618P-201ENST00000477850 296 ntBASIC14.69□□□□□ -0.06
LAMP1P11279 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.69□□□□□ -0.06
LAMP1P11279 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.69□□□□□ -0.06
LAMP1P11279 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.69□□□□□ -0.06
LAMP1P11279 AL109936.8-201ENST00000641772 604 ntBASIC14.69□□□□□ -0.06
LAMP1P11279 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.69□□□□□ -0.06
LAMP1P11279 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LAMP1P11279 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LAMP1P11279 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LAMP1P11279 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LAMP1P11279 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.69□□□□□ -0.06
LAMP1P11279 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LAMP1P11279 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.69□□□□□ -0.06
LAMP1P11279 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.69□□□□□ -0.06
LAMP1P11279 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LAMP1P11279 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.69□□□□□ -0.06
LAMP1P11279 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.69□□□□□ -0.06
LAMP1P11279 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LAMP1P11279 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.68□□□□□ -0.06
LAMP1P11279 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LAMP1P11279 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LAMP1P11279 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.68□□□□□ -0.06
LAMP1P11279 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
LAMP1P11279 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms