Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBCP0CG48 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
UBCP0CG48 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
UBCP0CG48 AL390755.1-201ENST00000623716 2027 ntBASIC13.65□□□□□ -0.22
UBCP0CG48 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBCP0CG48 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBCP0CG48 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.65□□□□□ -0.22
UBCP0CG48 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.65□□□□□ -0.22
UBCP0CG48 AC004832.2-201ENST00000426397 482 ntBASIC13.65□□□□□ -0.22
UBCP0CG48 FAM8A3P-201ENST00000427218 844 ntBASIC13.65□□□□□ -0.22
UBCP0CG48 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.65□□□□□ -0.22
UBCP0CG48 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.65□□□□□ -0.22
UBCP0CG48 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.65□□□□□ -0.22
UBCP0CG48 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.65□□□□□ -0.22
UBCP0CG48 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.65□□□□□ -0.22
UBCP0CG48 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.65□□□□□ -0.22
UBCP0CG48 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBCP0CG48 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.65□□□□□ -0.22
UBCP0CG48 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.65□□□□□ -0.22
UBCP0CG48 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.65□□□□□ -0.22
UBCP0CG48 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBCP0CG48 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBCP0CG48 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.65□□□□□ -0.22
UBCP0CG48 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBCP0CG48 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBCP0CG48 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.65□□□□□ -0.22
UBCP0CG48 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.65□□□□□ -0.22
UBCP0CG48 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBCP0CG48 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBCP0CG48 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBCP0CG48 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.65□□□□□ -0.22
UBCP0CG48 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBCP0CG48 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBCP0CG48 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.65□□□□□ -0.22
UBCP0CG48 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.65□□□□□ -0.22
UBCP0CG48 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBCP0CG48 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBCP0CG48 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.65□□□□□ -0.22
UBCP0CG48 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.23
UBCP0CG48 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
UBCP0CG48 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.64□□□□□ -0.23
UBCP0CG48 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.64□□□□□ -0.23
UBCP0CG48 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.64□□□□□ -0.23
UBCP0CG48 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.64□□□□□ -0.23
UBCP0CG48 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
UBCP0CG48 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.64□□□□□ -0.23
UBCP0CG48 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
UBCP0CG48 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.64□□□□□ -0.23
UBCP0CG48 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.64□□□□□ -0.23
UBCP0CG48 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
UBCP0CG48 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.64□□□□□ -0.23
UBCP0CG48 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.64□□□□□ -0.23
UBCP0CG48 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.64□□□□□ -0.23
UBCP0CG48 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
UBCP0CG48 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.64□□□□□ -0.23
UBCP0CG48 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.64□□□□□ -0.23
UBCP0CG48 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.64□□□□□ -0.23
UBCP0CG48 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.64□□□□□ -0.23
UBCP0CG48 AC105021.1-202ENST00000570572 669 ntBASIC13.64□□□□□ -0.23
UBCP0CG48 MTDHP5-201ENST00000598980 586 ntBASIC13.64□□□□□ -0.23
UBCP0CG48 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.64□□□□□ -0.23
UBCP0CG48 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.64□□□□□ -0.23
UBCP0CG48 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
UBCP0CG48 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
UBCP0CG48 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
UBCP0CG48 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.64□□□□□ -0.23
UBCP0CG48 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.64□□□□□ -0.23
UBCP0CG48 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
UBCP0CG48 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBCP0CG48 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
UBCP0CG48 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms