Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SPARCP09486 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SPARCP09486 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPARCP09486 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPARCP09486 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPARCP09486 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPARCP09486 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SPARCP09486 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPARCP09486 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPARCP09486 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPARCP09486 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPARCP09486 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPARCP09486 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPARCP09486 AC106881.1-201ENST00000605849 3329 ntBASIC13.86□□□□□ -0.19
SPARCP09486 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPARCP09486 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.86□□□□□ -0.19
SPARCP09486 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPARCP09486 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.86□□□□□ -0.19
SPARCP09486 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPARCP09486 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.86□□□□□ -0.19
SPARCP09486 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPARCP09486 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.86□□□□□ -0.19
SPARCP09486 FO393414.2-201ENST00000405153 598 ntBASIC13.86□□□□□ -0.19
SPARCP09486 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.86□□□□□ -0.19
SPARCP09486 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPARCP09486 GPS2P2-201ENST00000430745 888 ntBASIC13.86□□□□□ -0.19
SPARCP09486 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.86□□□□□ -0.19
SPARCP09486 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.86□□□□□ -0.19
SPARCP09486 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SPARCP09486 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
SPARCP09486 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
SPARCP09486 AC007967.4-201ENST00000614700 386 ntBASIC13.86□□□□□ -0.19
SPARCP09486 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SPARCP09486 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPARCP09486 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SPARCP09486 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.86□□□□□ -0.19
SPARCP09486 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPARCP09486 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SPARCP09486 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPARCP09486 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.86□□□□□ -0.19
SPARCP09486 ST20-AS1-201ENST00000560255 4223 ntBASIC13.86□□□□□ -0.19
SPARCP09486 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPARCP09486 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPARCP09486 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.86□□□□□ -0.19
SPARCP09486 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.86□□□□□ -0.19
SPARCP09486 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.86□□□□□ -0.19
SPARCP09486 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SPARCP09486 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.86□□□□□ -0.19
SPARCP09486 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SPARCP09486 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.86□□□□□ -0.19
SPARCP09486 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SPARCP09486 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPARCP09486 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SPARCP09486 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SPARCP09486 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SPARCP09486 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.85□□□□□ -0.19
SPARCP09486 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SPARCP09486 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.85□□□□□ -0.19
SPARCP09486 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPARCP09486 AL035456.1-201ENST00000456064 1369 ntBASIC13.85□□□□□ -0.19
SPARCP09486 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SPARCP09486 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SPARCP09486 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.85□□□□□ -0.19
SPARCP09486 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPARCP09486 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SPARCP09486 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SPARCP09486 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.85□□□□□ -0.19
SPARCP09486 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SPARCP09486 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPARCP09486 BX842568.4-201ENST00000421222 227 ntBASIC13.85□□□□□ -0.19
SPARCP09486 AP000347.1-202ENST00000435868 847 ntBASIC13.85□□□□□ -0.19
SPARCP09486 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.85□□□□□ -0.19
SPARCP09486 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.85□□□□□ -0.19
SPARCP09486 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.85□□□□□ -0.19
SPARCP09486 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.85□□□□□ -0.19
SPARCP09486 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.85□□□□□ -0.19
SPARCP09486 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SPARCP09486 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.85□□□□□ -0.19
SPARCP09486 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPARCP09486 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SPARCP09486 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPARCP09486 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPARCP09486 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.85□□□□□ -0.19
SPARCP09486 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.85□□□□□ -0.19
SPARCP09486 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
SPARCP09486 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPARCP09486 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPARCP09486 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SPARCP09486 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SPARCP09486 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPARCP09486 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.85□□□□□ -0.19
SPARCP09486 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPARCP09486 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SPARCP09486 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPARCP09486 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SPARCP09486 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SPARCP09486 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.85□□□□□ -0.19
SPARCP09486 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.85□□□□□ -0.19
SPARCP09486 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.85□□□□□ -0.19
SPARCP09486 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms