Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
POLR3DP05423 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
POLR3DP05423 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.5■□□□□ 0.55
POLR3DP05423 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.5■□□□□ 0.55
POLR3DP05423 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
POLR3DP05423 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
POLR3DP05423 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3DP05423 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3DP05423 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.49■□□□□ 0.55
POLR3DP05423 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3DP05423 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3DP05423 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3DP05423 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3DP05423 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.49■□□□□ 0.55
POLR3DP05423 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.49■□□□□ 0.55
POLR3DP05423 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
POLR3DP05423 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.49■□□□□ 0.55
POLR3DP05423 AC013268.4-201ENST00000637413 2228 ntBASIC18.49■□□□□ 0.55
POLR3DP05423 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3DP05423 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.49■□□□□ 0.55
POLR3DP05423 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3DP05423 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3DP05423 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.49■□□□□ 0.55
POLR3DP05423 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.49■□□□□ 0.55
POLR3DP05423 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3DP05423 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3DP05423 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3DP05423 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.49■□□□□ 0.55
POLR3DP05423 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.49■□□□□ 0.55
POLR3DP05423 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
POLR3DP05423 BCRP2-202ENST00000447763 634 ntBASIC18.49■□□□□ 0.55
POLR3DP05423 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3DP05423 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
POLR3DP05423 BCRP6-201ENST00000510112 632 ntBASIC18.49■□□□□ 0.55
POLR3DP05423 BCRP7-201ENST00000511549 544 ntBASIC18.49■□□□□ 0.55
POLR3DP05423 AC068587.3-201ENST00000526613 355 ntBASIC18.49■□□□□ 0.55
POLR3DP05423 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.49■□□□□ 0.55
POLR3DP05423 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.49■□□□□ 0.55
POLR3DP05423 AP001063.1-201ENST00000568332 529 ntBASIC18.49■□□□□ 0.55
POLR3DP05423 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.49■□□□□ 0.55
POLR3DP05423 AL022328.1-201ENST00000610050 478 ntBASIC18.49■□□□□ 0.55
POLR3DP05423 MIR6752-201ENST00000618442 71 ntBASIC18.49■□□□□ 0.55
POLR3DP05423 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3DP05423 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3DP05423 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
POLR3DP05423 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.49■□□□□ 0.55
POLR3DP05423 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.49■□□□□ 0.55
POLR3DP05423 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.49■□□□□ 0.55
POLR3DP05423 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3DP05423 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.49■□□□□ 0.55
POLR3DP05423 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3DP05423 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
POLR3DP05423 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3DP05423 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3DP05423 AC136621.1-201ENST00000624017 2304 ntBASIC18.49■□□□□ 0.55
POLR3DP05423 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.49■□□□□ 0.55
POLR3DP05423 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3DP05423 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
POLR3DP05423 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.49■□□□□ 0.55
POLR3DP05423 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
POLR3DP05423 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3DP05423 AL596257.1-201ENST00000641463 2694 ntBASIC18.48■□□□□ 0.55
POLR3DP05423 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3DP05423 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.48■□□□□ 0.55
POLR3DP05423 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.48■□□□□ 0.55
POLR3DP05423 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3DP05423 AC068587.6-202ENST00000641839 5619 ntBASIC18.48■□□□□ 0.55
POLR3DP05423 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3DP05423 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3DP05423 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3DP05423 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
POLR3DP05423 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.48■□□□□ 0.55
POLR3DP05423 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.48■□□□□ 0.55
POLR3DP05423 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3DP05423 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
POLR3DP05423 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3DP05423 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3DP05423 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3DP05423 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3DP05423 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.48■□□□□ 0.55
POLR3DP05423 AC007274.1-201ENST00000439805 662 ntBASIC18.48■□□□□ 0.55
POLR3DP05423 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.48■□□□□ 0.55
POLR3DP05423 AC093433.1-201ENST00000458048 571 ntBASIC18.48■□□□□ 0.55
POLR3DP05423 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.48■□□□□ 0.55
POLR3DP05423 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3DP05423 AP001582.1-201ENST00000525856 295 ntBASIC18.48■□□□□ 0.55
POLR3DP05423 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
POLR3DP05423 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.48■□□□□ 0.55
POLR3DP05423 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.48■□□□□ 0.55
POLR3DP05423 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.48■□□□□ 0.55
POLR3DP05423 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.48■□□□□ 0.55
POLR3DP05423 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
POLR3DP05423 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3DP05423 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3DP05423 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.48■□□□□ 0.55
POLR3DP05423 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.48■□□□□ 0.55
POLR3DP05423 AC092127.1-201ENST00000567093 3455 ntBASIC18.48■□□□□ 0.55
POLR3DP05423 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR3DP05423 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
POLR3DP05423 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms