Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
HMGN1P05114 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGN1P05114 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGN1P05114 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGN1P05114 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGN1P05114 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.09□□□□□ -0.15
HMGN1P05114 FAM58CP-201ENST00000435741 640 ntBASIC14.09□□□□□ -0.15
HMGN1P05114 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HMGN1P05114 KRT18P3-201ENST00000451602 1288 ntBASIC14.09□□□□□ -0.15
HMGN1P05114 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGN1P05114 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGN1P05114 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGN1P05114 AC079140.1-201ENST00000508039 487 ntBASIC14.09□□□□□ -0.15
HMGN1P05114 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGN1P05114 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.09□□□□□ -0.15
HMGN1P05114 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGN1P05114 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.09□□□□□ -0.15
HMGN1P05114 AC027601.4-201ENST00000611259 610 ntBASIC14.09□□□□□ -0.15
HMGN1P05114 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGN1P05114 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGN1P05114 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGN1P05114 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGN1P05114 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGN1P05114 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGN1P05114 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HMGN1P05114 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGN1P05114 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.09□□□□□ -0.15
HMGN1P05114 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGN1P05114 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGN1P05114 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGN1P05114 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGN1P05114 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
HMGN1P05114 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
HMGN1P05114 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGN1P05114 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMGN1P05114 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
HMGN1P05114 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
HMGN1P05114 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
HMGN1P05114 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.08□□□□□ -0.15
HMGN1P05114 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.08□□□□□ -0.15
HMGN1P05114 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
HMGN1P05114 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.08□□□□□ -0.15
HMGN1P05114 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMGN1P05114 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMGN1P05114 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
HMGN1P05114 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
HMGN1P05114 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.08□□□□□ -0.16
HMGN1P05114 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 GHSR-202ENST00000427970 912 ntBASIC14.08□□□□□ -0.16
HMGN1P05114 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.08□□□□□ -0.16
HMGN1P05114 AC009078.2-202ENST00000463353 338 ntBASIC14.08□□□□□ -0.16
HMGN1P05114 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HMGN1P05114 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.08□□□□□ -0.16
HMGN1P05114 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
HMGN1P05114 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.08□□□□□ -0.16
HMGN1P05114 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.08□□□□□ -0.16
HMGN1P05114 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.08□□□□□ -0.16
HMGN1P05114 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.08□□□□□ -0.16
HMGN1P05114 AC084121.4-201ENST00000641598 221 ntBASIC14.08□□□□□ -0.16
HMGN1P05114 AF228730.8-201ENST00000642140 221 ntBASIC14.08□□□□□ -0.16
HMGN1P05114 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 UXT-AS1-201ENST00000590504 1525 ntBASIC14.08□□□□□ -0.16
HMGN1P05114 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HMGN1P05114 REXO1L2P-201ENST00000425429 2069 ntBASIC14.08□□□□□ -0.16
HMGN1P05114 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
HMGN1P05114 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HMGN1P05114 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HMGN1P05114 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.08□□□□□ -0.16
HMGN1P05114 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.08□□□□□ -0.16
HMGN1P05114 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGN1P05114 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.08□□□□□ -0.16
HMGN1P05114 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.08□□□□□ -0.16
HMGN1P05114 AC005912.2-201ENST00000619492 2400 ntBASIC14.07□□□□□ -0.16
HMGN1P05114 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.07□□□□□ -0.16
HMGN1P05114 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.07□□□□□ -0.16
HMGN1P05114 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGN1P05114 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms