Protein–RNA interactions for Protein: P03372

ESR1, Estrogen receptor, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ESR1P03372 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.29■□□□□ 0.04
ESR1P03372 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ESR1P03372 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ESR1P03372 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.29■□□□□ 0.04
ESR1P03372 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ESR1P03372 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.29■□□□□ 0.04
ESR1P03372 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 CLK3P2-201ENST00000427566 1453 ntBASIC15.28■□□□□ 0.04
ESR1P03372 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.28■□□□□ 0.04
ESR1P03372 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.28■□□□□ 0.04
ESR1P03372 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ESR1P03372 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.28■□□□□ 0.04
ESR1P03372 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.28■□□□□ 0.04
ESR1P03372 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.28■□□□□ 0.04
ESR1P03372 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.28■□□□□ 0.04
ESR1P03372 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.28■□□□□ 0.04
ESR1P03372 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.28■□□□□ 0.04
ESR1P03372 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 TPRX2P-201ENST00000535362 881 ntBASIC15.28■□□□□ 0.04
ESR1P03372 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
ESR1P03372 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.28■□□□□ 0.04
ESR1P03372 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.28■□□□□ 0.04
ESR1P03372 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.28■□□□□ 0.04
ESR1P03372 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ESR1P03372 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ESR1P03372 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ESR1P03372 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ESR1P03372 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ESR1P03372 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ESR1P03372 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ESR1P03372 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
ESR1P03372 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.27■□□□□ 0.04
ESR1P03372 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ESR1P03372 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ESR1P03372 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ESR1P03372 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ESR1P03372 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.27■□□□□ 0.04
ESR1P03372 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
ESR1P03372 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
ESR1P03372 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.27■□□□□ 0.04
ESR1P03372 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ESR1P03372 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
ESR1P03372 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.27■□□□□ 0.04
ESR1P03372 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ESR1P03372 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.04
ESR1P03372 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ESR1P03372 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ESR1P03372 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ESR1P03372 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ESR1P03372 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ESR1P03372 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.27■□□□□ 0.04
ESR1P03372 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.27■□□□□ 0.04
ESR1P03372 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
ESR1P03372 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ESR1P03372 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.27■□□□□ 0.04
ESR1P03372 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.27■□□□□ 0.04
ESR1P03372 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.27■□□□□ 0.04
ESR1P03372 RRP7BP-205ENST00000566851 833 ntBASIC15.27■□□□□ 0.04
ESR1P03372 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ESR1P03372 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ESR1P03372 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
ESR1P03372 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ESR1P03372 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ESR1P03372 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
ESR1P03372 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.27■□□□□ 0.03
ESR1P03372 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ESR1P03372 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ESR1P03372 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ESR1P03372 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.27■□□□□ 0.03
ESR1P03372 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ESR1P03372 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ESR1P03372 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
ESR1P03372 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ESR1P03372 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ESR1P03372 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ESR1P03372 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ESR1P03372 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ESR1P03372 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ESR1P03372 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms