Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17■□□□□ 0.31
CD4P01730 ENPP7P14-201ENST00000621765 1040 ntBASIC17■□□□□ 0.31
CD4P01730 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD4P01730 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17■□□□□ 0.31
CD4P01730 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD4P01730 AC024909.3-201ENST00000611513 2257 ntBASIC17■□□□□ 0.31
CD4P01730 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CD4P01730 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17■□□□□ 0.31
CD4P01730 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD4P01730 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
CD4P01730 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CD4P01730 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD4P01730 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
CD4P01730 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD4P01730 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CD4P01730 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CD4P01730 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.99■□□□□ 0.31
CD4P01730 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CD4P01730 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.99■□□□□ 0.31
CD4P01730 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD4P01730 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD4P01730 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.99■□□□□ 0.31
CD4P01730 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
CD4P01730 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD4P01730 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.99■□□□□ 0.31
CD4P01730 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD4P01730 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CD4P01730 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.99■□□□□ 0.31
CD4P01730 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.99■□□□□ 0.31
CD4P01730 NKAIN1P1-201ENST00000435754 582 ntBASIC16.99■□□□□ 0.31
CD4P01730 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.99■□□□□ 0.31
CD4P01730 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD4P01730 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.99■□□□□ 0.31
CD4P01730 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.99■□□□□ 0.31
CD4P01730 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.99■□□□□ 0.31
CD4P01730 MIR4706-201ENST00000582134 82 ntBASIC16.99■□□□□ 0.31
CD4P01730 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.99■□□□□ 0.31
CD4P01730 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.99■□□□□ 0.31
CD4P01730 AC091812.3-201ENST00000621362 345 ntBASIC16.99■□□□□ 0.31
CD4P01730 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD4P01730 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD4P01730 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CD4P01730 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.99■□□□□ 0.31
CD4P01730 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD4P01730 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD4P01730 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD4P01730 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.99■□□□□ 0.31
CD4P01730 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CD4P01730 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.98■□□□□ 0.31
CD4P01730 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
CD4P01730 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CD4P01730 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.98■□□□□ 0.31
CD4P01730 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.98■□□□□ 0.31
CD4P01730 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.98■□□□□ 0.31
CD4P01730 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CD4P01730 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.98■□□□□ 0.31
CD4P01730 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
CD4P01730 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 MPRIPP1-201ENST00000452433 1089 ntBASIC16.98■□□□□ 0.31
CD4P01730 SERPINA13P-202ENST00000478994 924 ntBASIC16.98■□□□□ 0.31
CD4P01730 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.98■□□□□ 0.31
CD4P01730 AC044849.1-201ENST00000519737 1188 ntBASIC16.98■□□□□ 0.31
CD4P01730 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.98■□□□□ 0.31
CD4P01730 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CD4P01730 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.98■□□□□ 0.31
CD4P01730 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
CD4P01730 AC025181.2-201ENST00000606994 802 ntBASIC16.98■□□□□ 0.31
CD4P01730 AC007663.3-201ENST00000609632 465 ntBASIC16.98■□□□□ 0.31
CD4P01730 MIR6727-201ENST00000620702 65 ntBASIC16.98■□□□□ 0.31
CD4P01730 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.98■□□□□ 0.31
CD4P01730 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.98■□□□□ 0.31
CD4P01730 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.98■□□□□ 0.31
CD4P01730 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.98■□□□□ 0.31
CD4P01730 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CD4P01730 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CD4P01730 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms