Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.84□□□□□ -0.19
CNOT4O95628 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.84□□□□□ -0.19
CNOT4O95628 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.84□□□□□ -0.19
CNOT4O95628 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.84□□□□□ -0.19
CNOT4O95628 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.84□□□□□ -0.19
CNOT4O95628 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.84□□□□□ -0.19
CNOT4O95628 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.84□□□□□ -0.19
CNOT4O95628 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.84□□□□□ -0.19
CNOT4O95628 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CNOT4O95628 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CNOT4O95628 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CNOT4O95628 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CNOT4O95628 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.84□□□□□ -0.19
CNOT4O95628 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CNOT4O95628 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CNOT4O95628 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CNOT4O95628 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CNOT4O95628 AC024909.3-201ENST00000611513 2257 ntBASIC13.84□□□□□ -0.19
CNOT4O95628 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.84□□□□□ -0.19
CNOT4O95628 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.84□□□□□ -0.19
CNOT4O95628 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
CNOT4O95628 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.84□□□□□ -0.19
CNOT4O95628 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.84□□□□□ -0.19
CNOT4O95628 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CNOT4O95628 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CNOT4O95628 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.83□□□□□ -0.19
CNOT4O95628 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CNOT4O95628 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CNOT4O95628 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
CNOT4O95628 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.83□□□□□ -0.19
CNOT4O95628 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CNOT4O95628 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CNOT4O95628 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CNOT4O95628 AC018892.3-201ENST00000623986 2499 ntBASIC13.83□□□□□ -0.2
CNOT4O95628 AP002414.2-201ENST00000591780 3365 ntBASIC13.83□□□□□ -0.2
CNOT4O95628 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CNOT4O95628 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CNOT4O95628 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CNOT4O95628 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CNOT4O95628 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.83□□□□□ -0.2
CNOT4O95628 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CNOT4O95628 DGCR5-201ENST00000399539 862 ntBASIC13.83□□□□□ -0.2
CNOT4O95628 AL442647.2-201ENST00000429864 857 ntBASIC13.83□□□□□ -0.2
CNOT4O95628 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.83□□□□□ -0.2
CNOT4O95628 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CNOT4O95628 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CNOT4O95628 AC123567.1-201ENST00000548294 1261 ntBASIC13.83□□□□□ -0.2
CNOT4O95628 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.83□□□□□ -0.2
CNOT4O95628 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.83□□□□□ -0.2
CNOT4O95628 IGHV3-72-202ENST00000621503 303 ntBASIC13.83□□□□□ -0.2
CNOT4O95628 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.83□□□□□ -0.2
CNOT4O95628 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CNOT4O95628 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CNOT4O95628 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CNOT4O95628 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CNOT4O95628 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CNOT4O95628 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CNOT4O95628 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CNOT4O95628 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CNOT4O95628 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CNOT4O95628 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.83□□□□□ -0.2
CNOT4O95628 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CNOT4O95628 AL365203.3-201ENST00000609742 2057 ntBASIC13.83□□□□□ -0.2
CNOT4O95628 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CNOT4O95628 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.82□□□□□ -0.2
CNOT4O95628 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.82□□□□□ -0.2
CNOT4O95628 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CNOT4O95628 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNOT4O95628 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNOT4O95628 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CNOT4O95628 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CNOT4O95628 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNOT4O95628 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CNOT4O95628 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNOT4O95628 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.82□□□□□ -0.2
CNOT4O95628 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CNOT4O95628 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CNOT4O95628 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CNOT4O95628 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CNOT4O95628 AL512384.1-201ENST00000406683 331 ntBASIC13.82□□□□□ -0.2
CNOT4O95628 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
CNOT4O95628 MYCLP2-201ENST00000449268 967 ntBASIC13.82□□□□□ -0.2
CNOT4O95628 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNOT4O95628 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.82□□□□□ -0.2
CNOT4O95628 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CNOT4O95628 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.82□□□□□ -0.2
CNOT4O95628 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
CNOT4O95628 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
CNOT4O95628 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.82□□□□□ -0.2
CNOT4O95628 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.82□□□□□ -0.2
CNOT4O95628 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.82□□□□□ -0.2
CNOT4O95628 AL162274.1-201ENST00000617191 1098 ntBASIC13.82□□□□□ -0.2
CNOT4O95628 AC007431.3-201ENST00000623221 587 ntBASIC13.82□□□□□ -0.2
CNOT4O95628 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
CNOT4O95628 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNOT4O95628 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNOT4O95628 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CNOT4O95628 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNOT4O95628 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.82□□□□□ -0.2
CNOT4O95628 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms