Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.86■□□□□ 0.45
CTDNEP1O95476 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.86■□□□□ 0.45
CTDNEP1O95476 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.86■□□□□ 0.45
CTDNEP1O95476 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CTDNEP1O95476 BRI3BPP1-201ENST00000594224 787 ntBASIC17.86■□□□□ 0.45
CTDNEP1O95476 AL049840.4-201ENST00000602422 811 ntBASIC17.86■□□□□ 0.45
CTDNEP1O95476 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.86■□□□□ 0.45
CTDNEP1O95476 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.86■□□□□ 0.45
CTDNEP1O95476 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.86■□□□□ 0.45
CTDNEP1O95476 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CTDNEP1O95476 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTDNEP1O95476 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTDNEP1O95476 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTDNEP1O95476 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTDNEP1O95476 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.86■□□□□ 0.45
CTDNEP1O95476 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTDNEP1O95476 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.86■□□□□ 0.45
CTDNEP1O95476 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
CTDNEP1O95476 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.86■□□□□ 0.45
CTDNEP1O95476 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.86■□□□□ 0.45
CTDNEP1O95476 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.86■□□□□ 0.45
CTDNEP1O95476 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTDNEP1O95476 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.86■□□□□ 0.45
CTDNEP1O95476 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.86■□□□□ 0.45
CTDNEP1O95476 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CTDNEP1O95476 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTDNEP1O95476 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTDNEP1O95476 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTDNEP1O95476 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.85■□□□□ 0.45
CTDNEP1O95476 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTDNEP1O95476 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CTDNEP1O95476 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTDNEP1O95476 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTDNEP1O95476 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTDNEP1O95476 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CTDNEP1O95476 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTDNEP1O95476 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTDNEP1O95476 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTDNEP1O95476 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.85■□□□□ 0.45
CTDNEP1O95476 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTDNEP1O95476 MIR770-201ENST00000390219 98 ntBASIC17.85■□□□□ 0.45
CTDNEP1O95476 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTDNEP1O95476 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.85■□□□□ 0.45
CTDNEP1O95476 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTDNEP1O95476 AL353779.1-201ENST00000434793 351 ntBASIC17.85■□□□□ 0.45
CTDNEP1O95476 LILRP1-201ENST00000444199 1370 ntBASIC17.85■□□□□ 0.45
CTDNEP1O95476 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTDNEP1O95476 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CTDNEP1O95476 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTDNEP1O95476 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.85■□□□□ 0.45
CTDNEP1O95476 AC036164.1-201ENST00000570544 333 ntBASIC17.85■□□□□ 0.45
CTDNEP1O95476 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.85■□□□□ 0.45
CTDNEP1O95476 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTDNEP1O95476 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.85■□□□□ 0.45
CTDNEP1O95476 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTDNEP1O95476 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.85■□□□□ 0.45
CTDNEP1O95476 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.85■□□□□ 0.45
CTDNEP1O95476 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTDNEP1O95476 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.85■□□□□ 0.45
CTDNEP1O95476 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.85■□□□□ 0.45
CTDNEP1O95476 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.84■□□□□ 0.45
CTDNEP1O95476 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTDNEP1O95476 REXO1L5P-201ENST00000622260 2098 ntBASIC17.84■□□□□ 0.45
CTDNEP1O95476 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTDNEP1O95476 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTDNEP1O95476 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTDNEP1O95476 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CTDNEP1O95476 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTDNEP1O95476 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CTDNEP1O95476 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTDNEP1O95476 SLC7A15P-201ENST00000424028 1363 ntBASIC17.84■□□□□ 0.45
CTDNEP1O95476 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CTDNEP1O95476 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CTDNEP1O95476 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTDNEP1O95476 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTDNEP1O95476 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.84■□□□□ 0.45
CTDNEP1O95476 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.84■□□□□ 0.45
CTDNEP1O95476 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CTDNEP1O95476 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTDNEP1O95476 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CTDNEP1O95476 INGX-202ENST00000489074 768 ntBASIC17.84■□□□□ 0.45
CTDNEP1O95476 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.84■□□□□ 0.45
CTDNEP1O95476 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.84■□□□□ 0.45
CTDNEP1O95476 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.84■□□□□ 0.45
CTDNEP1O95476 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CTDNEP1O95476 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.84■□□□□ 0.45
CTDNEP1O95476 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTDNEP1O95476 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTDNEP1O95476 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTDNEP1O95476 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTDNEP1O95476 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTDNEP1O95476 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTDNEP1O95476 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
CTDNEP1O95476 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTDNEP1O95476 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.84■□□□□ 0.45
CTDNEP1O95476 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTDNEP1O95476 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTDNEP1O95476 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTDNEP1O95476 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTDNEP1O95476 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms