Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LTN1O94822 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LTN1O94822 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20■□□□□ 0.79
LTN1O94822 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20■□□□□ 0.79
LTN1O94822 AC079328.2-201ENST00000561241 3354 ntBASIC20■□□□□ 0.79
LTN1O94822 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20■□□□□ 0.79
LTN1O94822 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LTN1O94822 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
LTN1O94822 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LTN1O94822 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20■□□□□ 0.79
LTN1O94822 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC20■□□□□ 0.79
LTN1O94822 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LTN1O94822 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
LTN1O94822 AL365203.3-201ENST00000609742 2057 ntBASIC20■□□□□ 0.79
LTN1O94822 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20■□□□□ 0.79
LTN1O94822 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC20■□□□□ 0.79
LTN1O94822 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
LTN1O94822 HNRNPA1P41-201ENST00000397777 928 ntBASIC20■□□□□ 0.79
LTN1O94822 RPL17P11-201ENST00000417593 544 ntBASIC20■□□□□ 0.79
LTN1O94822 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC20■□□□□ 0.79
LTN1O94822 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC20■□□□□ 0.79
LTN1O94822 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
LTN1O94822 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC20■□□□□ 0.79
LTN1O94822 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LTN1O94822 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC20■□□□□ 0.79
LTN1O94822 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC20■□□□□ 0.79
LTN1O94822 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.99■□□□□ 0.79
LTN1O94822 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LTN1O94822 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LTN1O94822 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LTN1O94822 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LTN1O94822 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.99■□□□□ 0.79
LTN1O94822 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LTN1O94822 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LTN1O94822 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC19.99■□□□□ 0.79
LTN1O94822 CYP4F23P-201ENST00000593402 1579 ntBASIC19.99■□□□□ 0.79
LTN1O94822 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LTN1O94822 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC19.99■□□□□ 0.79
LTN1O94822 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC19.99■□□□□ 0.79
LTN1O94822 FGFR3P1-201ENST00000449999 601 ntBASIC19.99■□□□□ 0.79
LTN1O94822 AC090857.1-201ENST00000527400 390 ntBASIC19.99■□□□□ 0.79
LTN1O94822 RTN3P1-201ENST00000536295 711 ntBASIC19.99■□□□□ 0.79
LTN1O94822 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC19.99■□□□□ 0.79
LTN1O94822 RPS15-202ENST00000585665 467 ntTSL 3 BASIC19.99■□□□□ 0.79
LTN1O94822 AC020922.3-201ENST00000595064 547 ntBASIC19.99■□□□□ 0.79
LTN1O94822 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LTN1O94822 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LTN1O94822 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LTN1O94822 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LTN1O94822 LILRP1-201ENST00000444199 1370 ntBASIC19.99■□□□□ 0.79
LTN1O94822 CAP2P1-201ENST00000557743 1390 ntBASIC19.99■□□□□ 0.79
LTN1O94822 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LTN1O94822 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.99■□□□□ 0.79
LTN1O94822 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LTN1O94822 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
LTN1O94822 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LTN1O94822 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.99■□□□□ 0.79
LTN1O94822 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.99■□□□□ 0.79
LTN1O94822 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LTN1O94822 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LTN1O94822 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LTN1O94822 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC19.98■□□□□ 0.79
LTN1O94822 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LTN1O94822 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.98■□□□□ 0.79
LTN1O94822 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
LTN1O94822 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC19.98■□□□□ 0.79
LTN1O94822 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
LTN1O94822 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LTN1O94822 FAM58BP-201ENST00000439056 645 ntBASIC19.98■□□□□ 0.79
LTN1O94822 RN7SL67P-201ENST00000492147 296 ntBASIC19.98■□□□□ 0.79
LTN1O94822 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
LTN1O94822 CENPX-208ENST00000584347 799 ntTSL 2 BASIC19.98■□□□□ 0.79
LTN1O94822 RN7SL555P-201ENST00000584742 339 ntBASIC19.98■□□□□ 0.79
LTN1O94822 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LTN1O94822 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LTN1O94822 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LTN1O94822 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LTN1O94822 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LTN1O94822 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC19.98■□□□□ 0.79
LTN1O94822 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LTN1O94822 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LTN1O94822 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC19.98■□□□□ 0.79
LTN1O94822 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.98■□□□□ 0.79
LTN1O94822 AC018629.1-201ENST00000623381 1736 ntBASIC19.98■□□□□ 0.79
LTN1O94822 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LTN1O94822 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LTN1O94822 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LTN1O94822 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LTN1O94822 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC19.98■□□□□ 0.79
LTN1O94822 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LTN1O94822 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LTN1O94822 AC078875.1-201ENST00000431907 724 ntBASIC19.98■□□□□ 0.79
LTN1O94822 AC104073.2-201ENST00000453737 312 ntBASIC19.98■□□□□ 0.79
LTN1O94822 FADS2-212ENST00000522639 360 ntTSL 5 BASIC19.98■□□□□ 0.79
LTN1O94822 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC19.98■□□□□ 0.79
LTN1O94822 IQSEC3P1-201ENST00000538799 536 ntBASIC19.98■□□□□ 0.79
LTN1O94822 FADS2-215ENST00000574708 385 ntTSL 3 BASIC19.98■□□□□ 0.79
LTN1O94822 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC19.98■□□□□ 0.79
LTN1O94822 AC012044.1-201ENST00000603431 297 ntBASIC19.98■□□□□ 0.79
LTN1O94822 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms