Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC6.71□□□□□ -1.33
USH2AO75445 AC245100.5-201ENST00000452108 331 ntBASIC6.71□□□□□ -1.33
USH2AO75445 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
USH2AO75445 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC6.71□□□□□ -1.33
USH2AO75445 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC6.71□□□□□ -1.33
USH2AO75445 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC6.71□□□□□ -1.33
USH2AO75445 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC6.71□□□□□ -1.33
USH2AO75445 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC6.71□□□□□ -1.33
USH2AO75445 AC138696.2-201ENST00000607376 223 ntBASIC6.71□□□□□ -1.33
USH2AO75445 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.33
USH2AO75445 Z98259.2-201ENST00000641583 609 ntBASIC6.71□□□□□ -1.33
USH2AO75445 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
USH2AO75445 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC6.71□□□□□ -1.33
USH2AO75445 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
USH2AO75445 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
USH2AO75445 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
USH2AO75445 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC6.71□□□□□ -1.34
USH2AO75445 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 AC012441.2-201ENST00000444843 739 ntBASIC6.71□□□□□ -1.34
USH2AO75445 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC6.71□□□□□ -1.34
USH2AO75445 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC6.71□□□□□ -1.34
USH2AO75445 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC6.71□□□□□ -1.34
USH2AO75445 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC6.71□□□□□ -1.34
USH2AO75445 EEF1DP7-201ENST00000580496 513 ntBASIC6.71□□□□□ -1.34
USH2AO75445 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
USH2AO75445 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
USH2AO75445 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 RAN-210ENST00000541630 1475 ntTSL 2 BASIC6.71□□□□□ -1.34
USH2AO75445 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC6.71□□□□□ -1.34
USH2AO75445 SHC1P1-201ENST00000425230 1745 ntBASIC6.71□□□□□ -1.34
USH2AO75445 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 AL008718.2-201ENST00000609206 1313 ntBASIC6.71□□□□□ -1.34
USH2AO75445 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC6.71□□□□□ -1.34
USH2AO75445 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
USH2AO75445 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
USH2AO75445 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 HNRNPABP1-201ENST00000406003 734 ntBASIC6.71□□□□□ -1.34
USH2AO75445 AL592076.1-201ENST00000424448 303 ntBASIC6.71□□□□□ -1.34
USH2AO75445 AC090820.1-201ENST00000519722 591 ntBASIC6.71□□□□□ -1.34
USH2AO75445 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC6.71□□□□□ -1.34
USH2AO75445 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
USH2AO75445 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC6.71□□□□□ -1.34
USH2AO75445 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 GNE-204ENST00000539208 2190 ntTSL 2 BASIC6.71□□□□□ -1.34
USH2AO75445 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
USH2AO75445 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
USH2AO75445 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
USH2AO75445 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC6.71□□□□□ -1.34
USH2AO75445 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC6.71□□□□□ -1.34
USH2AO75445 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
USH2AO75445 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
USH2AO75445 KRT8P6-201ENST00000399259 1207 ntBASIC6.71□□□□□ -1.34
USH2AO75445 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 KRT18P46-201ENST00000435568 1279 ntBASIC6.71□□□□□ -1.34
USH2AO75445 AC092896.1-201ENST00000465850 380 ntBASIC6.71□□□□□ -1.34
USH2AO75445 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC6.71□□□□□ -1.34
USH2AO75445 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
USH2AO75445 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 NAT9-219ENST00000582524 573 ntTSL 4 BASIC6.71□□□□□ -1.34
USH2AO75445 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC6.71□□□□□ -1.34
USH2AO75445 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC6.71□□□□□ -1.34
USH2AO75445 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
USH2AO75445 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC6.71□□□□□ -1.34
USH2AO75445 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC6.71□□□□□ -1.34
USH2AO75445 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
USH2AO75445 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms