Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.85□□□□□ -0.19
CXCL13O43927 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.85□□□□□ -0.19
CXCL13O43927 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.85□□□□□ -0.19
CXCL13O43927 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.85□□□□□ -0.19
CXCL13O43927 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CXCL13O43927 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CXCL13O43927 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CXCL13O43927 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.85□□□□□ -0.19
CXCL13O43927 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.85□□□□□ -0.19
CXCL13O43927 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.85□□□□□ -0.19
CXCL13O43927 AP001582.1-201ENST00000525856 295 ntBASIC13.85□□□□□ -0.19
CXCL13O43927 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.85□□□□□ -0.19
CXCL13O43927 AC010319.3-201ENST00000597028 470 ntBASIC13.85□□□□□ -0.19
CXCL13O43927 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.85□□□□□ -0.19
CXCL13O43927 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.85□□□□□ -0.19
CXCL13O43927 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.85□□□□□ -0.19
CXCL13O43927 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.85□□□□□ -0.19
CXCL13O43927 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.85□□□□□ -0.19
CXCL13O43927 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CXCL13O43927 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CXCL13O43927 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CXCL13O43927 AL138799.1-201ENST00000448213 1675 ntBASIC13.85□□□□□ -0.19
CXCL13O43927 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL13O43927 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.84□□□□□ -0.19
CXCL13O43927 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CXCL13O43927 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL13O43927 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL13O43927 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CXCL13O43927 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CXCL13O43927 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL13O43927 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.84□□□□□ -0.19
CXCL13O43927 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.84□□□□□ -0.19
CXCL13O43927 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.84□□□□□ -0.19
CXCL13O43927 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL13O43927 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CXCL13O43927 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.84□□□□□ -0.19
CXCL13O43927 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.84□□□□□ -0.19
CXCL13O43927 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CXCL13O43927 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CXCL13O43927 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL13O43927 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL13O43927 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL13O43927 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL13O43927 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.84□□□□□ -0.19
CXCL13O43927 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CXCL13O43927 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.84□□□□□ -0.19
CXCL13O43927 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.84□□□□□ -0.19
CXCL13O43927 TTTY23B-201ENST00000442790 549 ntBASIC13.84□□□□□ -0.19
CXCL13O43927 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.84□□□□□ -0.19
CXCL13O43927 GIMAP3P-201ENST00000495150 836 ntBASIC13.84□□□□□ -0.19
CXCL13O43927 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL13O43927 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.84□□□□□ -0.19
CXCL13O43927 ENPP7P5-201ENST00000541031 1031 ntBASIC13.84□□□□□ -0.19
CXCL13O43927 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.84□□□□□ -0.19
CXCL13O43927 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.84□□□□□ -0.19
CXCL13O43927 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.84□□□□□ -0.19
CXCL13O43927 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.84□□□□□ -0.19
CXCL13O43927 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.84□□□□□ -0.19
CXCL13O43927 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.84□□□□□ -0.19
CXCL13O43927 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL13O43927 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL13O43927 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL13O43927 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.84□□□□□ -0.19
CXCL13O43927 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL13O43927 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL13O43927 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL13O43927 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL13O43927 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.84□□□□□ -0.19
CXCL13O43927 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.84□□□□□ -0.19
CXCL13O43927 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL13O43927 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CXCL13O43927 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CXCL13O43927 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.84□□□□□ -0.19
CXCL13O43927 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL13O43927 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms