Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC20.31■□□□□ 0.84
APAF1O14727 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
APAF1O14727 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
APAF1O14727 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
APAF1O14727 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
APAF1O14727 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
APAF1O14727 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC20.31■□□□□ 0.84
APAF1O14727 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC20.31■□□□□ 0.84
APAF1O14727 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC20.31■□□□□ 0.84
APAF1O14727 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC20.31■□□□□ 0.84
APAF1O14727 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC20.31■□□□□ 0.84
APAF1O14727 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
APAF1O14727 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.31■□□□□ 0.84
APAF1O14727 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
APAF1O14727 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC20.31■□□□□ 0.84
APAF1O14727 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC20.31■□□□□ 0.84
APAF1O14727 AL596257.1-201ENST00000641463 2694 ntBASIC20.31■□□□□ 0.84
APAF1O14727 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC20.31■□□□□ 0.84
APAF1O14727 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
APAF1O14727 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
APAF1O14727 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
APAF1O14727 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
APAF1O14727 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
APAF1O14727 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
APAF1O14727 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
APAF1O14727 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC20.31■□□□□ 0.84
APAF1O14727 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
APAF1O14727 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
APAF1O14727 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
APAF1O14727 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
APAF1O14727 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
APAF1O14727 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC20.3■□□□□ 0.84
APAF1O14727 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
APAF1O14727 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
APAF1O14727 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
APAF1O14727 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC20.3■□□□□ 0.84
APAF1O14727 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APAF1O14727 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APAF1O14727 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC20.3■□□□□ 0.84
APAF1O14727 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APAF1O14727 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APAF1O14727 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
APAF1O14727 TEX30-203ENST00000376022 828 ntTSL 2 BASIC20.3■□□□□ 0.84
APAF1O14727 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
APAF1O14727 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APAF1O14727 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
APAF1O14727 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.3■□□□□ 0.84
APAF1O14727 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
APAF1O14727 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC20.3■□□□□ 0.84
APAF1O14727 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.3■□□□□ 0.84
APAF1O14727 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC20.3■□□□□ 0.84
APAF1O14727 AC133539.2-201ENST00000604757 467 ntBASIC20.3■□□□□ 0.84
APAF1O14727 AC093813.1-201ENST00000605066 256 ntBASIC20.3■□□□□ 0.84
APAF1O14727 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APAF1O14727 RPSAP52-203ENST00000622976 1023 ntBASIC20.3■□□□□ 0.84
APAF1O14727 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
APAF1O14727 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
APAF1O14727 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
APAF1O14727 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
APAF1O14727 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APAF1O14727 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC20.3■□□□□ 0.84
APAF1O14727 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
APAF1O14727 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
APAF1O14727 AL157414.3-201ENST00000624276 1954 ntBASIC20.3■□□□□ 0.84
APAF1O14727 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
APAF1O14727 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
APAF1O14727 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
APAF1O14727 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APAF1O14727 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APAF1O14727 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APAF1O14727 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APAF1O14727 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
APAF1O14727 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
APAF1O14727 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
APAF1O14727 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APAF1O14727 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APAF1O14727 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
APAF1O14727 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
APAF1O14727 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC20.29■□□□□ 0.84
APAF1O14727 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APAF1O14727 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APAF1O14727 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APAF1O14727 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
APAF1O14727 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APAF1O14727 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC20.29■□□□□ 0.84
APAF1O14727 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
APAF1O14727 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APAF1O14727 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
APAF1O14727 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.29■□□□□ 0.84
APAF1O14727 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APAF1O14727 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
APAF1O14727 AL035633.1-201ENST00000406139 838 ntBASIC20.29■□□□□ 0.84
APAF1O14727 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC20.29■□□□□ 0.84
APAF1O14727 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC20.29■□□□□ 0.84
APAF1O14727 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC20.29■□□□□ 0.84
APAF1O14727 LINC02084-201ENST00000606069 1096 ntBASIC20.29■□□□□ 0.84
APAF1O14727 AC005252.2-201ENST00000624630 1141 ntBASIC20.29■□□□□ 0.84
APAF1O14727 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
APAF1O14727 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
APAF1O14727 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms