Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 BANF1P3-201ENST00000412556 261 ntBASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 AC055811.3-201ENST00000584952 686 ntBASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 PEBP1P2-201ENST00000603980 558 ntBASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 AC009560.1-201ENST00000620208 434 ntBASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM88BA6NKF7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 STK16-203ENST00000409516 895 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 RPSAP15-201ENST00000448168 861 ntBASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 FTH1P22-201ENST00000456305 520 ntBASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 AC244197.1-201ENST00000456494 951 ntBASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 AC026434.2-201ENST00000506094 1078 ntBASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 MIR6816-201ENST00000620368 66 ntBASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 INE2-201ENST00000630399 1874 ntBASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TMEM88BA6NKF7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 AL133373.2-201ENST00000623187 2828 ntBASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 AC004554.1-201ENST00000422830 1468 ntBASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 AC093909.3-201ENST00000504783 336 ntBASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM88BA6NKF7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms